PALMD (palmdelphin)

2014-11-01  

Identity

HGNC
PALMD
LOCATION
1p21.2
LOCUSID
54873
ALIAS
C1orf11,PALML
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 54873
MIM: 610182
HGNC: 15846
Ensembl: ENSG00000099260

Variants:

dbSNP: 54873
ClinVar: 54873
TCGA: ENSG00000099260
COSMIC: PALMD

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000099260ENST00000263174Q9NP74
ENSG00000099260ENST00000263174A0A0S2Z5E7
ENSG00000099260ENST00000605497S4R313
ENSG00000099260ENST00000615664Q9NP74

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
195843462009Genetic variants associated with cardiac structure and function: a meta-analysis and replication of genome-wide association data.93
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
248100572014Palmdelphin, a novel target of p53 with Ser46 phosphorylation, controls cell death in response to DNA damage.16
295111672018A transcriptome-wide association study identifies PALMD as a susceptibility gene for calcific aortic valve stenosis.8

Citation

Dessen P

PALMD (palmdelphin)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/71642/palmd