RNFT2 (ring finger protein, transmembrane 2)

2014-11-01  

Identity

HGNC
RNFT2
LOCATION
12q24.22
LOCUSID
84900
ALIAS
TMEM118
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 84900
HGNC: 25905
Ensembl: ENSG00000135119

Variants:

dbSNP: 84900
ClinVar: 84900
TCGA: ENSG00000135119
COSMIC: RNFT2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000135119ENST00000257575Q96EX2
ENSG00000135119ENST00000319176F8W6L4
ENSG00000135119ENST00000392549Q96EX2
ENSG00000135119ENST00000407967Q96EX2
ENSG00000135119ENST00000547718F8VZS7
ENSG00000135119ENST00000622220A0A087X026

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA443635Cardiovascular DiseasesDiseaseVariantAnnotationnot associatedPD24816038
PA446021Vascular DiseasesDiseaseVariantAnnotationnot associatedPD24816038
PA451089pravastatinChemicalVariantAnnotationnot associatedPD24816038

Citation

Dessen P

RNFT2 (ring finger protein, transmembrane 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72716/rnft2