TAF5L (TATA-box binding protein associated factor 5 like)

2014-11-01 Affiliation

Identity

HGNC

TAF5L

LOCATION

1q42.13

LOCUSID

27097

ALIAS

PAF65B

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 27097
HGNC: 17304
Ensembl: ENSG00000135801

Variants:

dbSNP: 27097
ClinVar: 27097
TCGA: ENSG00000135801
COSMIC: TAF5L

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000135801	ENST00000258281	O75529
ENSG00000135801	ENST00000366674	Q5TDI7
ENSG00000135801	ENST00000366675	O75529
ENSG00000135801	ENST00000366676	O75529

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Basal transcription factors	KEGG	ko03022
Basal transcription factors	KEGG	hsa03022
Herpes simplex infection	KEGG	ko05168
Herpes simplex infection	KEGG	hsa05168
Chromatin organization	REACTOME	R-HSA-4839726
Chromatin modifying enzymes	REACTOME	R-HSA-3247509
HATs acetylate histones	REACTOME	R-HSA-3214847

References

Pubmed ID	Year	Title	Citations
17476304	2007	Cooperative interactions between CBP and TORC2 confer selectivity to CREB target gene expression.	83
16829519	2006	PCAF modulates PTEN activity.	68
16126174	2005	Six lysine residues on c-Myc are direct substrates for acetylation by p300.	23
16672693	2006	Muscle cell survival mediated by the transcriptional coactivators p300 and PCAF displays different requirements for acetyltransferase activity.	7
16206511	2005	The TAF5L gene on chromosome 1q42 is associated with type 1 diabetes in Russian affected patients.	2
16206511	2005	The TAF5L gene on chromosome 1q42 is associated with type 1 diabetes in Russian affected patients.	2

Citation

Dessen P

TAF5L (TATA-box binding protein associated factor 5 like)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74471/taf5l