TRANK1 (tetratricopeptide repeat and ankyrin repeat containing 1)

2010-01-01  

Identity

HGNC
TRANK1
LOCATION
3p22.2
LOCUSID
9881
ALIAS
LBA1
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 9881
HGNC: 29011
Ensembl: ENSG00000168016

Variants:

dbSNP: 9881
ClinVar: 9881
TCGA: ENSG00000168016
COSMIC: TRANK1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000168016ENST00000429976O15050
ENSG00000168016ENST00000463764A0A096LPF5
ENSG00000168016ENST00000643881A0A2R8Y7N6
ENSG00000168016ENST00000645898A0A2R8YEM9
ENSG00000168016ENST00000646436A0A2R8Y890
ENSG00000168016ENST00000646897A0A2R8Y8A3

Expression (GTEx)

0
50
100
150
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
221829352013Genome-wide association study meta-analysis of European and Asian-ancestry samples identifies three novel loci associated with bipolar disorder.67

Citation

Dessen P

TRANK1 (tetratricopeptide repeat and ankyrin repeat containing 1)

Atlas Genet Cytogenet Oncol Haematol. 2010-01-01

Online version: http://atlasgeneticsoncology.org/gene/51292/trank1