GPRC5A (G protein-coupled receptor, family C, group 5, member A)

2013-02-01   Yuho Maki , Humam Kadara 

Department of Thoracic\\\/Head, Neck Medical Oncology, University of Texas MD Anderson Cancer Center, Houston, Texas, USA

Identity

HGNC
LOCATION
12p13.1
LOCUSID
ALIAS
GPCR5A,PEIG-1,RAI3,RAIG1,TIG1
FUSION GENES

DNA/RNA

Note

This gene encodes a member of the type 3 G protein-coupling receptor family, characterized by the signature 7-transmembrane domain motif. Through signaling with retinoic acid, it plays a critical role in development, cellular growth, and differentiation. The GPRC5A gene is not known at the present time to be amplified or lost in pathological disease including cancer. Mice with knockout of this gene were shown to develop spontaneous lung tumors.

Description

The GPRC5A gene is composed of 12 exons spanning a region of 253002 bp.

Transcription

There are several regulatory transcription factor binding sites in the GPRC5A promoter including p53, AP-1, c-Jun, STAT3, RAR, RXR, HFH-3 and LyF-1. For details see GeneCards.

Pseudogene

There are no known pseudogenes.

Proteins

Note

This is a G-protein coupled receptor protein typified by its seven-pass transmembrane character. The GPRC5A transcript and protein are predominantly expressed in fetal and adult normal lung tissue as well as in kidney tissues suggesting a highly probably important role in the embryonic development and maturation of these organs. There are no major variants. Three variants have been described based on three single nucleotide polymorphisms. However, the functional consequence of these variants is currently unknown (see UniProt).

Description

The GPRC5A protein is an orphan G-protein coupled receptor for which there is no known ligand yet. GPRC5A protein is composed of 357 amino acids. The GPRC5A protein is comprised of seven-transmembrane domains and regions as well as domains extracellular and four cytoplasmic domains. The protein is known to be glycosylated at residue 157. Moreover, studies have shown that this protein can be phosphorylated at Tyrosine residues 317, 320, 345, 347 and 350.

Expression

The GPRC5A protein is expressed at high levels in fetal and adult normal lung tissue and expressed at low to moderate levels in various organ tissues including fetal kidney and adult placenta, kidney, prostate, testis, ovary, small intestine, colon, stomach, and spinal cord. It is not detectable in fetal heart, brain, and liver and adult heart, brain, liver, skeletal muscle, pancreas, spleen, thymus, and peripheral leukocytes. Analysis has shown that GPRC5A protein is low in murine and human lung tumors. GPRC5A protein is reduced in non-small cell lung cancers (NSCLCs) and in smoking-injured airway epithelium and in pathological lung conditions such as chronic obstructive pulmonary disease.

Localisation

The GPRC5A protein was shown to be localized to the cell membrane, cytosol, golgi apparatus and endoplasmic reticulum.

Function

GPRC5A was shown to be induced by retinoic acid treatment in head and neck and lung cancer cells. The function of GPRC5A is still poorly characterized. Limited studies from a few groups have demonstrated that this protein inhibits nuclear factor-kappa B signaling.

Homology

Member of the G-protein coupled receptor 3 family and displays 67% homology with its murine counterpart.

Mutations

Note

Mutations in this gene are poorly characterized. Non-somatic single nucleotide polymorphisms have been characterized however the functional consequence of these is unknown (see GeneCards).

Implicated in

Entity name
Breast cancer
Note
Limited studies have shown that human GPRC5A is elevated in human breast cancer specimens and promotes the growth of breast cancer cells.
Entity name
Lung cancer
Note
GPRC5A is highly expressed in fetal and adult normal lung tissue suggesting that it plays important roles in the embryonic development, maturation and differentiation of these epithelial organs. A study has shown that mice with knockout of both alleles of this gene developed lung adenomas and adenocarcinomas at 12 months onwards at a much higher rate compared to their wild type littermates. The incidence and size of lung tumors was substantially and significantly increased following exposure of Gprc5a knockout mice to the tobacco-specific carcinogen NNK. Moreover, another study derived a gene expression signature from non-malignant lung epithelial Gprc5a knockout and wild type cells and showed that this signature, indicating GPRC5A loss, was associated with poor survival and prognosis in human lung cancer following cross-comparative analysis of human lung cancer microarray datasets. Mechanistically, loss of Gprc5a was shown to induce constitutive activation of the Nf-kB transcriptional factor leading to observed acidic macrophage pneumonia and inflammation in the lung and subsequent increased cellular migration, invasion and oncogenesis. Moreover, loss of Gprc5a was shown to increase JAK/STAT signaling in turn causing elevated cell growth, proliferation and survival. Further, and in accordance with the previous findings of GPRC5A-mediated inhibition of NF-kB, treatment of Gprc5a knockout mice with NTHI increased the severity of observed adenomas implicating inflammation in the course of carcinogenesis downstream of Gprc5a loss.
Disease
Non-small cell lung cancer, lung adenocarcinoma, lung squamous cell carcinoma, adenomas.
Prognosis
A gene-expression signature indicating loss of Gprc5A was derived by comparing transcriptome of non-malignant Gprc5a knockout cells compared to wild type cells. This expression signature was found to be highly predictive of poor survival and prognosis in human lung cancer and in particular in human lung adenocarcinomas.
Entity name
Chronic obstructive pulmonary disease (COPD)
Note
GPRC5A protein, analyzed by immunohistochemical analysis, was shown to be decreased in histologically normal bronchial airway epithelia in COPD patients compared to normal airways from phenotypically normal non-smokers and smokers. Moreover, GPRC5A immunohistochemical protein expression was further decreased in normal bronchial epithelia of patients with both COPD and NSCLC. Given the field cancerization principle and the predisposition of COPD patients to lung cancer, these findings suggest that the GPRC5A protein may be implicated in COPD-associated lung cancer development.
Disease
Lung cancer.

Bibliography

Pubmed IDLast YearTitleAuthors
195938932009GPRC5A: A potential tumor suppressor and oncogene.Acquafreda T et al
222399132012Enhancement of lung tumorigenesis in a Gprc5a Knockout mouse by chronic extrinsic airway inflammation.Barta P et al
209594902010Gprc5a deletion enhances the transformed phenotype in normal and malignant lung epithelial cells by eliciting persistent Stat3 signaling induced by autocrine leukemia inhibitory factor.Chen Y et al
98570331998Molecular cloning and characterization of a novel retinoic acid-inducible gene that encodes a putative G protein-coupled receptor.Cheng Y et al
203541642010Knockout of the tumor suppressor gene Gprc5a in mice leads to NF-kappaB activation in airway epithelium and promotes lung inflammation and tumorigenesis.Deng J et al
231545452012G-protein coupled receptor family C, group 5, member A (GPRC5A) expression is decreased in the adjacent field and normal bronchial epithelia of patients with chronic obstructive pulmonary disease and non-small-cell lung cancer.Fujimoto J et al
170554592006Novel reciprocal regulation of cAMP signaling and apoptosis by orphan G-protein-coupled receptor GPRC5A gene expression.Hirano M et al
195528062009Production and characterisation of monoclonal antibodies against RAI3 and its expression in human breast cancer.Jörissen H et al
205632522010A Gprc5a tumor suppressor loss of expression signature is conserved, prevalent, and associated with survival in human lung adenocarcinomas.Kadara H et al
157886392005Identification of RAI3 as a therapeutic target for breast cancer.Nagahata T et al
180002152007A new tumor suppressor gene, selective for lung cancer.Sporn MB et al
180002182007Identification of the retinoic acid-inducible Gprc5a as a new lung tumor suppressor gene.Tao Q et al
156594062005Integrative genomics revealed RAI3 is a cell growth-promoting gene and a novel P53 transcriptional target.Wu Q et al
192794072009Mechanisms underlying the induction of the putative human tumor suppressor GPRC5A by retinoic acid.Ye X et al

Other Information

Locus ID:

NCBI: 9052
MIM: 604138
HGNC: 9836
Ensembl: ENSG00000013588

Variants:

dbSNP: 9052
ClinVar: 9052
TCGA: ENSG00000013588
COSMIC: GPRC5A

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000013588ENST00000014914Q8NFJ5
ENSG00000013588ENST00000534831F5GWG3
ENSG00000013588ENST00000540125H0YFN2
ENSG00000013588ENST00000648791A0A3B3ITN8

Expression (GTEx)

0
50
100
150
200
250

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
249847032014MiR-103a-3p targets the 5' UTR of GPRC5A in pancreatic cells.49
180002182007Identification of the retinoic acid-inducible Gprc5a as a new lung tumor suppressor gene.39
257447202015Lung Tumor Suppressor GPRC5A Binds EGFR and Restrains Its Effector Signaling.27
273871242017Single-cell Sequencing Reveals Variants in ARID1A, GPRC5A and MLL2 Driving Self-renewal of Human Bladder Cancer Stem Cells.21
205632522010A Gprc5a tumor suppressor loss of expression signature is conserved, prevalent, and associated with survival in human lung adenocarcinomas.17
231545452012G-protein coupled receptor family C, group 5, member A (GPRC5A) expression is decreased in the adjacent field and normal bronchial epithelia of patients with chronic obstructive pulmonary disease and non-small-cell lung cancer.16
156594062005Integrative genomics revealed RAI3 is a cell growth-promoting gene and a novel P53 transcriptional target.15
192794072009Mechanisms underlying the induction of the putative human tumor suppressor GPRC5A by retinoic acid.14
292834242017Integrated MicroRNA-mRNA Analysis Reveals miR-204 Inhibits Cell Proliferation in Gastric Cancer by Targeting CKS1B, CXCL1 and GPRC5A.14
272733042016GPRC5A suppresses protein synthesis at the endoplasmic reticulum to prevent radiation-induced lung tumorigenesis.12

Citation

Yuho Maki ; Humam Kadara

GPRC5A (G protein-coupled receptor, family C, group 5, member A)

Atlas Genet Cytogenet Oncol Haematol. 2013-02-01

Online version: http://atlasgeneticsoncology.org/gene/43793/gprc5a