SRD5A2 (steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2))

2013-05-01   Nelson LS Tang , Chen Di Liao 

Department of Chemical Pathology, The Chinese University of Hong Kong, China

Identity

HGNC
LOCATION
2p23.1
LOCUSID
ALIAS
-
FUSION GENES

DNA/RNA

Description

Genomic DNA of SRD5A2 gene spans about 58.6 kbp on chromosome 2p23.

Transcription

Five exons with a long 3 UTR.

Proteins

Description

SRD5A2 is a microsomal protein of 254 amino acids in length.

Expression

Androgen sensitive tissues, such as prostate.

Localisation

Microsome.

Function

SRD5A2 protein is an enzyme that converts testosterone to 5-alpha dihydrotestosterone (DHT) and progesterone or corticosterone into 5-alpha-3-oxosteroids. It is active at acidic pH, and is inhibited by finasteride.

Homology

50% homology with human SRD5A1 isoenzyme and 46% homology with rat 5-alpha-reductase.

Mutations

Note

There were over 29 mutations of SRD5A2 gene documented in literature, including 12 single amino acid missense substitutions (Makridakis et al., 2000; Vilchis et al., 2008; Nie et al., 2011). It has been suggested that exon 4 may be a mutation hotspot region on the SRD5A2 gene (Vilchis et al., 2008). Some of the more studied polymorphisms of SRD5A2 included V89L, A49T, and the (TA)n dinucleotide repeat.

Implicated in

Entity name
Prostate cancer
Note
Various genetic studies from multiple ethnic populations have shown genetic variations in the SRD5A2 gene are associated with prostate cancer. Polymorphisms V89L, A29T, and the (TA)n repeat are some of well-known SRD5A2 variation that have been liked to prostate cancer risk. However, these associations are not always consistent. For example, the V89L (rs523349) variant is a missense single nucleotide polymorphism resulting in a valine to leucine substitution at condon 89 that reduced SRD5A2 enzyme activity. More than couple dozen of studies performed genetic association studies between V89L polymorphism and prostate cancer risk since 1997. Although the association has been found significant repeatedly, the results were inconsistent and conflicting (Nam et al., 2001; Salam et al., 2005, Hsing et al., 2001). Recently, a meta-analysis review (Wang et al., 2010) was conducted on 25 genetic studies of SRD5A2 V89L polymorphism and prostate cancer, which included additional subgroup analysis in Asian, African, European and age ≤ 65 group. In overall analysis, no significant association was found between V89L and prostate cancer risk. Subgroup analysis revealed a slight but significant increased risk in European men with at least one L-allele (LL+LV vs VV, OR=1.11; 95%CI=1.03-1.19; P
Oncogenesis
Androgen levels have been suggested to play an important role in the etiology of prostate cancer. The same SRD5A2 genetic variations linked to prostate cancer has also been repeatedly shown to be associated with various circulating androgen level in the blood, including testosterone, dihydrotestosterone and various forms of their metabolites (Makridakis et al., 2000; Allen et al., 2001; Hsing et al., 2001). Therefore, it is possible that these risk-predisposing polymorphisms may cause changes in the SRD5A2 enzyme functional activity that results in the variation of circulating androgens, and ultimately leads to the development of prostate cancer.

Bibliography

Pubmed IDLast YearTitleAuthors
113035862001The association between polymorphisms in the CYP17 and 5alpha-reductase (SRD5A2) genes and serum androgen concentrations in men.Allen NE et al
115881342001Polymorphic markers in the SRD5A2 gene and prostate cancer risk: a population-based case-control study.Hsing AW et al
105855842000International trends and patterns of prostate cancer incidence and mortality.Hsing AW et al
208554742010Association of SRD5A2 variants and serum androstane-3alpha,17beta-diol glucuronide concentration in Chinese elderly men.Jiang J et al
108981102000Biochemical and pharmacogenetic dissection of human steroid 5 alpha-reductase type II.Makridakis NM et al
111641812001V89L polymorphism of type-2, 5-alpha reductase enzyme gene predicts prostate cancer presence and progression.Nam RK et al
207362512011Five novel mutations of SRD5A2 found in eight Chinese patients with 46,XY disorders of sex development.Nie M et al
160189392005Associations between polymorphisms in the steroid 5-alpha reductase type II (SRD5A2) gene and benign prostatic hyperplasia and prostate cancer.Salam MT et al
183502502008Novel compound heterozygous mutations in the SRD5A2 gene from 46,XY infants with ambiguous external genitalia.Vilchis F et al
197606312010SRD5A2 V89L polymorphism and prostate cancer risk: a meta-analysis.Wang C et al
124469832002Ethnic differences in the frequency of prostate cancer susceptibility alleles at SRD5A2 and CYP3A4.Zeigler-Johnson CM et al

Other Information

Locus ID:

NCBI: 6716
MIM: 607306
HGNC: 11285
Ensembl: ENSG00000277893

Variants:

dbSNP: 6716
ClinVar: 6716
TCGA: ENSG00000277893
COSMIC: SRD5A2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000277893ENST00000622030P31213

Expression (GTEx)

0
5
10
15
20
25
30

Pathways

PathwaySourceExternal ID
Steroid hormone biosynthesisKEGGko00140
Prostate cancerKEGGko05215
Steroid hormone biosynthesisKEGGhsa00140
Prostate cancerKEGGhsa05215
MetabolismREACTOMER-HSA-1430728
Metabolism of lipids and lipoproteinsREACTOMER-HSA-556833
Metabolism of steroid hormonesREACTOMER-HSA-196071
Androgen biosynthesisREACTOMER-HSA-193048

References

Pubmed IDYearTitleCitations
195982352009Genes related to sex steroids, neural growth, and social-emotional behavior are associated with autistic traits, empathy, and Asperger syndrome.92
199131212009Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.85
184317432008Consortium analysis of 7 candidate SNPs for ovarian cancer.41
195059202009Single and multigenic analysis of the association between variants in 12 steroid hormone metabolism genes and risk of prostate cancer.40
202003322010Family-based analysis of candidate genes for polycystic ovary syndrome.40
207340642010A large-scale candidate gene association study of age at menarche and age at natural menopause.38
175076242007Evaluation of genetic variations in the androgen and estrogen metabolic pathways as risk factors for sporadic and familial prostate cancer.37
211478892011Phenotypical, biological, and molecular heterogeneity of 5α-reductase deficiency: an extensive international experience of 55 patients.36
152126872004Expression of progesterone metabolizing enzyme genes (AKR1C1, AKR1C2, AKR1C3, SRD5A1, SRD5A2) is altered in human breast carcinoma.33
124469832002Ethnic differences in the frequency of prostate cancer susceptibility alleles at SRD5A2 and CYP3A4.30

Citation

Nelson LS Tang ; Chen Di Liao

SRD5A2 (steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2))

Atlas Genet Cytogenet Oncol Haematol. 2013-05-01

Online version: http://atlasgeneticsoncology.org/gene/42385/srd5a2