Atlas of Genetics and Cytogenetics in Oncology and Haematology


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FCGR2B

Identity

Other namesCD32
FCG2
FCGR2
IGFR2
HGNC FCGR2B
Location 1q22
Location_base_pair Starts at 159899564 and ends at 159914575 bp from pter ( according to hg18-Mar_2006).
Local_order location, by FISH/genome sequencing; FCGR2B is contained within a locus that spans approximately 200kb and that encodes 5 low affinity IgG Fc receptor genes.The published gene orientation is as follows; Cen 1q -- 3' FCGR2A 5' -- 5'- FCGR3A - 3' -- 3' FCGR2B 5' -- 5' - FCGR3B - 3' -- 5'- FCGR2C- 3'.

DNA/RNA

Description The FCGR2B gene spans a 15kb genomic region; Gene orientation : centromere - 3' FCGR2B 5' - telomere; 8 exons (denoted S1, S2, EC1, EC2, TM, IC1, IC2, IC3). S1 and S2 encode the signal peptide domain, EC1 and EC2 encode the extracellular domain, TM encodes the transmembrane domain and IC1, IC2, IC3 encode the intracytoplasmic region.
Transcription 1.7kb mRNA. Two alternately spliced mRNA exist in humans; FcgRIIb1 and FcgRIIb2 (a 19 aa insertion encoded by IC1 is present in b1 but not in b2).

Protein

Description 40kD transmembrane glycoprotein that possesses an intracytoplasmic Immunoreceptor Tyrosine-based Inhibition Motif (ITIM) (encoded by IC3).
Expression B, myeloid and mast cells.
Localisation Transmembrane.
Function Low affinity IgG Fc receptor. Founding member ITIM family of immune inhibitory receptors. Fc gamma RIIB functions to down-regulate activatory responses mediated by Immunoreceptor Tyrosine-based Inhibition Motif (ITAM) bearing receptors such as the B-cell receptor on B cells. For example, on B-cells, negative regulation of B-cell receptor activatory signalling is initiated through co-recruitment of BCR and Fc gamma RIIB to IgG/ immune complexes. This leads to tyrosyl phosphorylation of the Fc gamma RIIB ITIM motif / recruitment of the inositol phosphatase SHIP and activation of the adaptor protein Dok - these events ultimately lead to the inhibition of ITAM-dependant Ca++ mobilisation and cellular proliferation (reduced MAPK signalling), respectively.
A proapoptotic signal through the Fc gamma RIIB transmembrane sequence has been described in conditions of homo-aggregation of Fc gamma RII on murine B cells.
Homology Contains two immunoglobulin-like C2 domains.

Implicated in

Entity 1q21-23 rearrangements in NHL (Nnon-Hodgkins Lymphoma)
Disease NHL (< 5% of cases with 1q21-23 breaks)
Prognosis It is now known that cytogenetically determined 1q21-23 breaks can target a diversity of 1q21-23 genes. Early data has suggested a poor prognosis for 1q21 rearrangements in diffuse large cell lymphoma.
Cytogenetics Deregulation of the FCGR2B gene by chromosomal translocation was first demonstrated in 3 NHL patients that showed a t(1;22)(q22;q22) in association with a t(14;18)(q32;q21). Two further cases of NHL with rearrangements affecting the FCGR2B region have since been identified. Both cases also showed t(14;18)(see below for description). This suggests a role for this deregulation in lymphoma progression.
Hybrid/Mutated Gene Dysregulation of the FCGR2B gene has been identified as a consequence of a t(1;22)(q22;q11) (3 patients) and t(1;14)(q21;q32) (1 patient). The FCGR2B coding sequence and promoter region appear to remain intact in these translocations. The principal consequence is overexpression of the Fc gamma RIIb2 isoform of Fc gamma RIIB. Deregulation of FCGR2B most likely occurs as a consequence of Ig gene transcriptional enhancer activity. Other mechanisms may exist ; an NHL patient with dup(1)(q21q25) and rearrangement in the FCGR2B region has also been identified.
Abnormal Protein None
Oncogenesis Contribution of FCGR2B deregulation to lymphoma development or progression is currently not known.
  

External links

Nomenclature
HGNCFCGR2B   3618
Entrez_GeneFCGR2B  2213  Fc fragment of IgG, low affinity IIb, receptor (CD32)
Cards
AtlasFCGR2BID397
GeneCardsFCGR2B
EnsemblFCGR2B [Search_View]   ENSG00000072694 [Gene_View]
GenatlasFCGR2B
GeneLynxFCGR2B
eGenomeFCGR2B
euGene2213
Genomic and cartography
GoldenPathFCGR2B  -  1q22   chr1:159899564-159914575 +  1q23   [Description]    (hg18-Mar_2006)
EnsemblFCGR2B - 1q23 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneFCGR2B
Gene and transcription
GenbankAB050934 [ ENTREZ ]
GenbankAB051387 [ ENTREZ ]
GenbankAB209585 [ ENTREZ ]
GenbankAF543826 [ ENTREZ ]
GenbankAI692546 [ ENTREZ ]
RefSeqNM_001002273 [ SRS ]    NM_001002273 [ ENTREZ ]
RefSeqNM_001002274 [ SRS ]    NM_001002274 [ ENTREZ ]
RefSeqNM_001002275 [ SRS ]    NM_001002275 [ ENTREZ ]
RefSeqNM_004001 [ SRS ]    NM_004001 [ ENTREZ ]
RefSeqAC_000044 [ SRS ]    AC_000044 [ ENTREZ ]
RefSeqAC_000133 [ SRS ]    AC_000133 [ ENTREZ ]
RefSeqNC_000001 [ SRS ]    NC_000001 [ ENTREZ ]
RefSeqNT_004487 [ SRS ]    NT_004487 [ ENTREZ ]
RefSeqNW_001838532 [ SRS ]    NW_001838532 [ ENTREZ ]
RefSeqNW_926128 [ SRS ]    NW_926128 [ ENTREZ ]
AceViewFCGR2B AceView - NCBI
UnigeneHs.713617 [ SRS ]    Hs.713617 [ NCBI ]     HS713617 [ spliceNest ]
Fast-db17499 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtP31994 [ SRS]    P31994 [ EXPASY ]     P31994 [ INTERPRO ]     P31994 [ UNIPROT ]
PrositePS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
InterproIPR013151 Ig [ SRS ]    IPR013151 Ig [ EBI ]
InterproIPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
InterproIPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
InterproIPR003599 Ig_sub [ SRS ]    IPR003599 Ig_sub [ EBI ]
CluSTrP31994
PfamPF00047 ig [ SRS ]    PF00047 ig [ Sanger ]    pfam00047 [ NCBI-CDD ]
SmartSM00409 IG [EMBL]
BlocksP31994
PDB2FCB [ SRS ]    2FCB [ PdbSum ],   2FCB [ IMB ]   2FCB [ RSDB ]
HPRD06849
Protein Interaction databases
DIPP31994
IntActP31994
Polymorphism : SNP, mutations, diseases
OMIM152700;604590;611162    [ map ]   
GENECLINICS152700;604590;611162
SNPFCGR2B [dbSNP-NCBI]  
SNPNM_001002273 [SNP-NCI]  
SNPNM_001002274 [SNP-NCI]  
SNPNM_001002275 [SNP-NCI]  
SNPNM_004001 [SNP-NCI]  
SNPFCGR2B [GeneSNPs - Utah]  FCGR2B] [HGBASE - SRS]
HAPMAPFCGR2B [HAPMAP]  
COSMICFCGR2B [Somatic mutation (COSMIC-CGP-Sanger)]  
TICdbFCGR2B [Translocation breakpoints In Cancer]  
HGMDFCGR2B
General knowledge
Family BrowserFCGR2B [UCSC Family Browser]
SOURCENM_001002273
SOURCENM_001002274
SOURCENM_001002275
SOURCENM_004001
SMDHs.713617
SAGEHs.713617
GOreceptor activity [Amigo]  receptor activity
GOprotein binding [Amigo]  protein binding
GOplasma membrane [Amigo]  plasma membrane
GOplasma membrane [Amigo]  plasma membrane
GOimmune response [Amigo]  immune response
GOsignal transduction [Amigo]  signal transduction
GOintegral to membrane [Amigo]  integral to membrane
GOIgG binding [Amigo]  IgG binding
GOinterspecies interaction between organisms [Amigo]  interspecies interaction between organisms
BIOCARTAB Lymphocyte Cell Surface Molecules    [Genes]
KEGGB cell receptor signaling pathway
PubGeneFCGR2B
TreeFamFCGR2B
CTD2213 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeCancer Cytogenetics (Bari)
ProbeFCGR2B Related clones (RZPD - Berlin)
PubMed
PubMed77 Pubmed reference(s) in Entrez

Bibliography

Fc receptor biology.
Daˆ´ron M
Annual review of immunology. 1997 ; 15 : 203-234.
PMID 9143687
 
The IgG Fc receptor, FcgammaRIIB, is a target for deregulation by chromosomal translocation in malignant lymphoma.
Callanan MB, Le Baccon P, Mossuz P, Duley S, Bastard C, Hamoudi R, Dyer MJ, Klobeck G, Rimokh R, Sotto JJ, Leroux D
Proceedings of the National Academy of Sciences of the United States of America. 2000 ; 97 (1) : 309-314.
PMID 10618414
 
Immune inhibitory receptors.
Ravetch JV, Lanier LL
Science (New York, N.Y.). 2000 ; 290 (5489) : 84-89.
PMID 11021804
 
Deregulation of FCGR2B expression by 1q21 rearrangements in follicular lymphomas.
Chen W, Palanisamy N, Schmidt H, Teruya-Feldstein J, Jhanwar SC, Zelenetz AD, Houldsworth J, Chaganti RS
Oncogene. 2001 ; 20 (52) : 7686-7693.
PMID 11753646
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written02-2002Mary Callanan, Dominique Leroux

Citation

This paper should be referenced as such :
Callanan M, Leroux D . FCGR2B. Atlas Genet Cytogenet Oncol Haematol. February 2002 .
URL : http://AtlasGeneticsOncology.org/Genes/FCGR2BID397.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Oct 14 21:19:02 2008


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