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FGFR3 (Fibroblast Growth Factor Receptor 3)

Identity

Hugo FGFR3
Location 4p16.3
Local_order centromere - IT 15 - FGFR 3 - IDUA - MYL 5 - ZNF 141 - telomere

DNA/RNA

 
  c-FGFR3 (4p16.3) in normal cells: PAC 1054L13 (above) and PAC 1174P18 (below) - Courtesy Mariano Rocchi, Resources for Molecular Cytogenetics. Laboratories willing to validate the probes are wellcome: contact M Rocchi
Description 16.5 Kb; 19 exons; exon 1 unknown in human
Transcription 4.0 Kb mRNA; large 3' untranslated region (1.4 kb); alternative splicing of exons 7 and 8 gives rise to two isoforms IIIb and IIIc

Protein

 
  Protein Diagram
Description 806 amino acids; 115 kDa; tyrosine kinase receptor; contains three major domains: an extracellular domain with 3 Ig-like loops, a highly hydrophobic transmembrane domain (22 amino acids) and an intracellular domain with tyrosine kinase activity
Expression mostly in brain, cartilage, liver, inner ear, kidney
Localisation plasma membrane
Function FGF receptor with tyrosine kinase activity; binding of ligand (FGF) induces receptor dimerization, autophosphorylation and signal transduction
Homology with other FGFR (1, 2 and 4); Cek 2 in chicken

Implicated in

Entity t(4;14)(p16.3;q32.3)/multiple myeloma --> FGFR3 -IgH
Disease plasma cell leukaemia and multiple myeloma
Prognosis unknown: found in 11 cases, but with no data on clinics
Abnormal Protein no fusion protein, but promoter exchange between both partner genes
Oncogenesis overexpression and activation of FGFR 3 provides an oncogenic signal
  
Entity squeletal dysplasia (inborn diseases)
Disease hypochondroplasia, achondroplasia, thanatophoric dwarfism (TD I and II), Crouzon syndrome with acanthosis nigricans and coronal craniosynostosis; endochondral and membranous ossification defects are caused by recurrent missense mutations
  

Breakpoints

 
Note Chromosome 4 breakpoints are clustured in a 50-70 kb region centromeric to FGFR 3

External links

Nomenclature
HugoFGFR3
GDBFGFR3
Entrez_GeneFGFR3  2261  fibroblast growth factor receptor 3 (achondroplasia, thanatophoric dwarfism)
Cards
AtlasFGFR99
GeneCardsFGFR3
EnsemblFGFR3 [Search_View]   ENSG00000068078 [Gene_View]
GenatlasFGFR3
GeneLynxFGFR3
eGenomeFGFR3
euGene2261
Genomic and cartography
GoldenPathFGFR3  -  4p16.3   chr4:1765421-1780396 +  4p16.3    (hg18-Mar_2006)
EnsemblFGFR3 - 4p16.3 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneFGFR3
Gene and transcription
GenbankAB209441 [ ENTREZ ]
GenbankAF238374 [ ENTREZ ]
GenbankAF245114 [ ENTREZ ]
GenbankAF369211 [ ENTREZ ]
GenbankAF369212 [ ENTREZ ]
RefSeqNM_000142 [ SRS ]    NM_000142 [ ENTREZ ]
RefSeqNM_022965 [ SRS ]    NM_022965 [ ENTREZ ]
RefSeqAC_000047 [ SRS ]    AC_000047 [ ENTREZ ]
RefSeqNC_000004 [ SRS ]    NC_000004 [ ENTREZ ]
RefSeqNT_006081 [ SRS ]    NT_006081 [ ENTREZ ]
RefSeqNW_921918 [ SRS ]    NW_921918 [ ENTREZ ]
AceViewFGFR3 AceView - NCBI
UnigeneHs.1420 [ SRS ]    Hs.1420 [ NCBI ]     HS1420 [ spliceNest ]
Fast-db1069 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtP22607 [ SRS]    P22607 [ EXPASY ]     P22607 [ INTERPRO ]
PrositePS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
PrositePS00107 PROTEIN_KINASE_ATP [ SRS ]    PS00107 PROTEIN_KINASE_ATP [ Expasy ]
PrositePS50011 PROTEIN_KINASE_DOM [ SRS ]    PS50011 PROTEIN_KINASE_DOM [ Expasy ]
PrositePS00109 PROTEIN_KINASE_TYR [ SRS ]    PS00109 PROTEIN_KINASE_TYR [ Expasy ]
InterproIPR013151 Ig [ SRS ]    IPR013151 Ig [ EBI ]
InterproIPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
InterproIPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
InterproIPR013098 Ig_I-set [ SRS ]    IPR013098 Ig_I-set [ EBI ]
InterproIPR003599 Ig_sub [ SRS ]    IPR003599 Ig_sub [ EBI ]
InterproIPR003598 Ig_sub2 [ SRS ]    IPR003598 Ig_sub2 [ EBI ]
InterproIPR000719 Prot_kinase_core [ SRS ]    IPR000719 Prot_kinase_core [ EBI ]
InterproIPR001245 Tyr_pkinase [ SRS ]    IPR001245 Tyr_pkinase [ EBI ]
InterproIPR008266 Tyr_pkinase_AS [ SRS ]    IPR008266 Tyr_pkinase_AS [ EBI ]
CluSTrP22607
PfamPF07679 I-set [ SRS ]    PF07679 I-set [ Sanger ]    pfam07679 [ NCBI-CDD ]
PfamPF00047 ig [ SRS ]    PF00047 ig [ Sanger ]    pfam00047 [ NCBI-CDD ]
PfamPF07714 Pkinase_Tyr [ SRS ]    PF07714 Pkinase_Tyr [ Sanger ]    pfam07714 [ NCBI-CDD ]
SmartSM00409 IG [EMBL]
SmartSM00408 IGc2 [EMBL]
SmartSM00219 TyrKc [EMBL]
ProdomPD000001 Prot_kinase[INRA-Toulouse]
ProdomP22607 FGFR3_HUMAN [ Domain structure ]   P22607 FGFR3_HUMAN  [ sequences sharing at least 1 domain ]
BlocksP22607
PDB1RY7 [ SRS ]    1RY7 [ PdbSum ],   1RY7 [ IMB ]   1RY7 [ RSDB ]
HPRD00624
Protein Interaction databases
DIPP22607
IntActP22607
Polymorphism : SNP, mutations, diseases
OMIM100800;109800;134934;146000;149730;162900;187600;602849;603956;610474    [ map ]   
GENECLINICS100800;109800;134934;146000;149730;162900;187600;602849;603956;610474
SNPFGFR3 [dbSNP-NCBI]  
SNPNM_000142 [SNP-NCI]  
SNPNM_022965 [SNP-NCI]  
SNPFGFR3 [GeneSNPs - Utah]  FGFR3] [HGBASE - SRS]
HAPMAPFGFR3 [HAPMAP]  
COSMICFGFR3 [Somatic mutation (COSMIC-CGP-Sanger)]  
TICdbFGFR3 [Translocation breakpoints In Cancer]  
HGMDFGFR3
General knowledge
Family BrowserFGFR3 [UCSC Family Browser]
SOURCENM_000142
SOURCENM_022965
SMDHs.1420
SAGEHs.1420
Enzyme2.7.10.1 [ Enzyme-SRS ]   2.7.10.1 [ Brenda-SRS ]   2.7.10.1 [ KEGG ]   2.7.10.1 [ WIT ]
GOMAPKKK cascade [Amigo]  MAPKKK cascade
GOnucleotide binding [Amigo]  nucleotide binding
GOskeletal development [Amigo]  skeletal development
GOprotein-tyrosine kinase activity [Amigo]  protein-tyrosine kinase activity
GOreceptor activity [Amigo]  receptor activity
GOfibroblast growth factor receptor activity [Amigo]  fibroblast growth factor receptor activity
GOATP binding [Amigo]  ATP binding
GOintegral to plasma membrane [Amigo]  integral to plasma membrane
GOprotein amino acid phosphorylation [Amigo]  protein amino acid phosphorylation
GOJAK-STAT cascade [Amigo]  JAK-STAT cascade
GOsensory perception of sound [Amigo]  sensory perception of sound
GOfibroblast growth factor receptor signaling pathway [Amigo]  fibroblast growth factor receptor signaling pathway
GOmembrane [Amigo]  membrane
GOcell growth [Amigo]  cell growth
GOtransferase activity [Amigo]  transferase activity
GOidentical protein binding [Amigo]  identical protein binding
KEGGMAPK signaling pathway
KEGGRegulation of actin cytoskeleton
PubGeneFGFR3
TreeFamFGFR3
Other databases
Probes
ProbeFGFR3 (4p16.3) in normal cells (Bari)
ProbeFGFR3 Related clones (RZPD - Berlin)
PubMed
PubMed185 Pubmed reference(s) in LocusLink

Bibliography

Mutations in the gene encoding fibroblast growth factor receptor-3 in achondroplasia.
Rousseau F, Bonaventure J, Legeai-Mallet L, Pelet A, Rozet JM, Maroteaux P, Le Merrer M, Munnich A
Nature. 1994 ; 371 (6494) : 252-254.
PMID 8078586
 
FGFR activation in skeletal disorders: too much of a good thing.
Webster MK, Donoghue DJ
Trends in genetics : TIG. 1997 ; 13 (5) : 178-182.
PMID 9154000
 
Frequent translocation t(4;14)(p16.3;q32.3) in multiple myeloma is associated with increased expression and activating mutations of fibroblast growth factor receptor 3.
Chesi M, Nardini E, Brents LA, Schrˆck E, Ried T, Kuehl WM, Bergsagel PL
Nature genetics. 1997 ; 16 (3) : 260-264.
PMID 9207791
 
A novel chromosomal translocation t(4; 14)(p16.3; q32) in multiple myeloma involves the fibroblast growth-factor receptor 3 gene.
Richelda R, Ronchetti D, Baldini L, Cro L, Viggiano L, Marzella R, Rocchi M, Otsuki T, Lombardi L, Maiolo AT, Neri A
Blood. 1997 ; 90 (10) : 4062-4070.
PMID 9354676
 
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written02-1998Jacky Bonaventure
Unité INSERM 393, Hopital Necker-Enfants Malades 149 rue de Sèvres 75743 Paris Cedex 15, France

Citation

This paper should be referenced as such :
Bonaventure J . FGFR3 (Fibroblast Growth Factor Receptor 3). Atlas Genet Cytogenet Oncol Haematol. February 1998 .
URL : http://AtlasGeneticsOncology.org/Genes/FGFR99.html

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon May 12 18:04:11 2008


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