ABR (active BCR-related gene)

Identity

Other names	FLJ45954
	MDB
HGNC	ABR
Location	17p13
Location_base_pair	Starts at 853509 and ends at 959074 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	ABR   81
Entrez_Gene	ABR  29  active BCR-related gene
	Cards
GeneCards	ABR
Ensembl	ABR [Search_View]   ENSG00000159842 [Gene_View]
Genatlas	ABR
GeneLynx	ABR
eGenome	ABR
euGene	29
	Genomic and cartography
GoldenPath	ABR  -  17p13   chr17:853509-959074 -  17p13.3   [Description]    (hg18-March_2006)
Ensembl	ABR - 17p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ABR
	Gene and transcription
Genbank	AI763107 [ ENTREZ ]
Genbank	AK094544 [ ENTREZ ]
Genbank	AK124547 [ ENTREZ ]
Genbank	AK126882 [ ENTREZ ]
Genbank	AK127851 [ ENTREZ ]
RefSeq	NM_001092 [ SRS ]    NM_001092 [ ENTREZ ]
RefSeq	NM_021962 [ SRS ]    NM_021962 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010718 [ SRS ]    NT_010718 [ ENTREZ ]
RefSeq	NW_001838403 [ SRS ]    NW_001838403 [ ENTREZ ]
RefSeq	NW_926584 [ SRS ]    NW_926584 [ ENTREZ ]
AceView	ABR AceView - NCBI
Unigene	Hs.159306 [ SRS ]    Hs.159306 [ NCBI ]     HS159306 [ spliceNest ]
Fast-db	369 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q12979 [ SRS]    Q12979 [ EXPASY ]     Q12979 [ INTERPRO ]     Q12979 [ UNIPROT ]
Prosite	PS50004 C2 [ SRS ]    PS50004 C2 [ Expasy ]
Prosite	PS00741 DH_1 [ SRS ]    PS00741 DH_1 [ Expasy ]
Prosite	PS50010 DH_2 [ SRS ]    PS50010 DH_2 [ Expasy ]
Prosite	PS50003 PH_DOMAIN [ SRS ]    PS50003 PH_DOMAIN [ Expasy ]
Prosite	PS50238 RHOGAP [ SRS ]    PS50238 RHOGAP [ Expasy ]
Interpro	IPR000008 C2_Ca-dep [ SRS ]    IPR000008 C2_Ca-dep [ EBI ]
Interpro	IPR000219 DH-domain [ SRS ]    IPR000219 DH-domain [ EBI ]
Interpro	IPR001331 GDS_CDC24_CS [ SRS ]    IPR001331 GDS_CDC24_CS [ EBI ]
Interpro	IPR001849 PH [ SRS ]    IPR001849 PH [ EBI ]
Interpro	IPR000198 RhoGAP [ SRS ]    IPR000198 RhoGAP [ EBI ]
CluSTr	Q12979
Pfam	PF00168 C2 [ SRS ]    PF00168 C2 [ Sanger ]    pfam00168 [ NCBI-CDD ]
Pfam	PF00169 PH [ SRS ]    PF00169 PH [ Sanger ]    pfam00169 [ NCBI-CDD ]
Pfam	PF00620 RhoGAP [ SRS ]    PF00620 RhoGAP [ Sanger ]    pfam00620 [ NCBI-CDD ]
Pfam	PF00621 RhoGEF [ SRS ]    PF00621 RhoGEF [ Sanger ]    pfam00621 [ NCBI-CDD ]
Smart	SM00239 C2 [EMBL]
Smart	SM00233 PH [EMBL]
Smart	SM00324 RhoGAP [EMBL]
Smart	SM00325 RhoGEF [EMBL]
Blocks	Q12979
HPRD	02649
	Protein Interaction databases
DIP	Q12979
IntAct	Q12979
	Polymorphism : SNP, mutations, diseases
OMIM	155255;600365    [ map ]
GENECLINICS	155255;600365
SNP	ABR [dbSNP-NCBI]
SNP	NM_001092 [SNP-NCI]
SNP	NM_021962 [SNP-NCI]
SNP	ABR [GeneSNPs - Utah]  ABR] [HGBASE - SRS]
HAPMAP	ABR [HAPMAP]
HGMD	ABR
	General knowledge
Family Browser	ABR [UCSC Family Browser]
SOURCE	NM_001092
SOURCE	NM_021962
SMD	Hs.159306
SAGE	Hs.159306
GO	guanyl-nucleotide exchange factor activity [Amigo]  guanyl-nucleotide exchange factor activity
GO	Rho guanyl-nucleotide exchange factor activity [Amigo]  Rho guanyl-nucleotide exchange factor activity
GO	GTPase activator activity [Amigo]  GTPase activator activity
GO	intracellular [Amigo]  intracellular
GO	intracellular signaling cascade [Amigo]  intracellular signaling cascade
GO	small GTPase mediated signal transduction [Amigo]  small GTPase mediated signal transduction
GO	regulation of Rho protein signal transduction [Amigo]  regulation of Rho protein signal transduction
PubGene	ABR
TreeFam	ABR
CTD	29 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ABR Related clones (RZPD - Berlin)
	PubMed
PubMed	10 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:28:54 2008