ADAMTS16 (ADAM metallopeptidase with thrombospondin type 1 motif, 16)

Identity

Other names	ADAMTS16s
	FLJ16731
HGNC	ADAMTS16
Location	5p15
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	ADAMTS16   17108
Entrez_Gene	ADAMTS16  170690  ADAM metallopeptidase with thrombospondin type 1 motif, 16
	Cards
GeneCards	ADAMTS16
Ensembl	ADAMTS16 [Search_View]   ENSG00000145536 [Gene_View]
Genatlas	ADAMTS16
GeneLynx	ADAMTS16
eGenome	ADAMTS16
euGene	170690
	Genomic and cartography
GoldenPath	ADAMTS16  -  5p15   chr5:5193443-5373412 +  5p15.32   [Description]    (hg18-March_2006)
Ensembl	ADAMTS16 - 5p15.32 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ADAMTS16
	Gene and transcription
Genbank	AB095949 [ ENTREZ ]
Genbank	AJ315734 [ ENTREZ ]
Genbank	AK122980 [ ENTREZ ]
Genbank	AK127746 [ ENTREZ ]
Genbank	BC140297 [ ENTREZ ]
RefSeq	NM_139056 [ SRS ]    NM_139056 [ ENTREZ ]
RefSeq	AC_000048 [ SRS ]    AC_000048 [ ENTREZ ]
RefSeq	AC_000137 [ SRS ]    AC_000137 [ ENTREZ ]
RefSeq	NC_000005 [ SRS ]    NC_000005 [ ENTREZ ]
RefSeq	NT_006576 [ SRS ]    NT_006576 [ ENTREZ ]
RefSeq	NW_001838926 [ SRS ]    NW_001838926 [ ENTREZ ]
RefSeq	NW_922518 [ SRS ]    NW_922518 [ ENTREZ ]
AceView	ADAMTS16 AceView - NCBI
Unigene	Hs.661915 [ SRS ]    Hs.661915 [ NCBI ]     HS661915 [ spliceNest ]
Fast-db	1180 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q2XQZ0 [ SRS]    Q2XQZ0 [ EXPASY ]     Q2XQZ0 [ INTERPRO ]     Q2XQZ0 [ UNIPROT ]
Prosite	PS50215 ADAM_MEPRO [ SRS ]    PS50215 ADAM_MEPRO [ Expasy ]
Interpro	IPR001590 Peptidase_M12B [ SRS ]    IPR001590 Peptidase_M12B [ EBI ]
Interpro	IPR002870 Peptidase_M12B_N [ SRS ]    IPR002870 Peptidase_M12B_N [ EBI ]
CluSTr	Q2XQZ0
Pfam	PF01562 Pep_M12B_propep [ SRS ]    PF01562 Pep_M12B_propep [ Sanger ]    pfam01562 [ NCBI-CDD ]
Pfam	PF01421 Reprolysin [ SRS ]    PF01421 Reprolysin [ Sanger ]    pfam01421 [ NCBI-CDD ]
Blocks	Q2XQZ0
HPRD	06331
	Protein Interaction databases
DIP	Q2XQZ0
IntAct	Q2XQZ0
	Polymorphism : SNP, mutations, diseases
OMIM	607510    [ map ]
GENECLINICS	607510
SNP	ADAMTS16 [dbSNP-NCBI]
SNP	NM_139056 [SNP-NCI]
SNP	ADAMTS16 [GeneSNPs - Utah]  ADAMTS16] [HGBASE - SRS]
HAPMAP	ADAMTS16 [HAPMAP]
COSMIC	ADAMTS16 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	ADAMTS16
	General knowledge
Family Browser	ADAMTS16 [UCSC Family Browser]
SOURCE	NM_139056
SMD	Hs.661915
SAGE	Hs.661915
GO	metalloendopeptidase activity [Amigo]  metalloendopeptidase activity
GO	extracellular region [Amigo]  extracellular region
GO	proteinaceous extracellular matrix [Amigo]  proteinaceous extracellular matrix
GO	proteolysis [Amigo]  proteolysis
GO	zinc ion binding [Amigo]  zinc ion binding
GO	metal ion binding [Amigo]  metal ion binding
PubGene	ADAMTS16
TreeFam	ADAMTS16
CTD	170690 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ADAMTS16 Related clones (RZPD - Berlin)
	PubMed
PubMed	4 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 19:59:00 2008