ADAMTS7 (ADAM metallopeptidase with thrombospondin type 1 motif, 7)

Identity

Other names	ADAM-TS7
	DKFZp434H204
Hugo	ADAMTS7
Location	15q24.2
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	ADAMTS7
GDB	ADAMTS7
Entrez_Gene	ADAMTS7  11173  ADAM metallopeptidase with thrombospondin type 1 motif, 7
	Cards
GeneCards	ADAMTS7
Ensembl	ADAMTS7 [Search_View]   ENSG00000136378 [Gene_View]
Genatlas	ADAMTS7
GeneLynx	ADAMTS7
eGenome	ADAMTS7
euGene	11173
	Genomic and cartography
GoldenPath	ADAMTS7  -  15q24.2   chr15:76838600-76890828 -  15q25.1    (hg18-March_2006)
Ensembl	ADAMTS7 - 15q25.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ADAMTS7
	Gene and transcription
Genbank	AB209497 [ ENTREZ ]
Genbank	AF140675 [ ENTREZ ]
Genbank	AL110226 [ ENTREZ ]
Genbank	AL359934 [ ENTREZ ]
Genbank	AY327122 [ ENTREZ ]
RefSeq	NM_014272 [ SRS ]    NM_014272 [ ENTREZ ]
RefSeq	AC_000058 [ SRS ]    AC_000058 [ ENTREZ ]
RefSeq	NC_000015 [ SRS ]    NC_000015 [ ENTREZ ]
RefSeq	NT_010194 [ SRS ]    NT_010194 [ ENTREZ ]
RefSeq	NW_925907 [ SRS ]    NW_925907 [ ENTREZ ]
AceView	ADAMTS7 AceView - NCBI
Unigene	Hs.16441 [ SRS ]    Hs.16441 [ NCBI ]     HS16441 [ spliceNest ]
Fast-db	8985 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9UKP4 [ SRS]    Q9UKP4 [ EXPASY ]     Q9UKP4 [ INTERPRO ]
Prosite	PS50215 ADAM_MEPRO [ SRS ]    PS50215 ADAM_MEPRO [ Expasy ]
Prosite	PS00546 CYSTEINE_SWITCH [ SRS ]    PS00546 CYSTEINE_SWITCH [ Expasy ]
Prosite	PS00427 DISINTEGRIN_1 [ SRS ]    PS00427 DISINTEGRIN_1 [ Expasy ]
Prosite	PS50214 DISINTEGRIN_2 [ SRS ]    PS50214 DISINTEGRIN_2 [ Expasy ]
Prosite	PS50092 TSP1 [ SRS ]    PS50092 TSP1 [ Expasy ]
Prosite	PS00142 ZINC_PROTEASE [ SRS ]    PS00142 ZINC_PROTEASE [ Expasy ]
Interpro	IPR010294 ADAM_spacer1 [ SRS ]    IPR010294 ADAM_spacer1 [ EBI ]
Interpro	IPR001762 Blood-coag_inhib_Disintegrin [ SRS ]    IPR001762 Blood-coag_inhib_Disintegrin [ EBI ]
Interpro	IPR001818 Pept_M10A_M12B [ SRS ]    IPR001818 Pept_M10A_M12B [ EBI ]
Interpro	IPR006025 Pept_M_Zn_BS [ SRS ]    IPR006025 Pept_M_Zn_BS [ EBI ]
Interpro	IPR001590 Peptidase_M12B [ SRS ]    IPR001590 Peptidase_M12B [ EBI ]
Interpro	IPR013273 Peptidase_M12B_ADAM-TS [ SRS ]    IPR013273 Peptidase_M12B_ADAM-TS [ EBI ]
Interpro	IPR002870 Peptidase_M12B_N [ SRS ]    IPR002870 Peptidase_M12B_N [ EBI ]
Interpro	IPR000884 TSP1 [ SRS ]    IPR000884 TSP1 [ EBI ]
Interpro	IPR008085 TSP_1 [ SRS ]    IPR008085 TSP_1 [ EBI ]
CluSTr	Q9UKP4
Pfam	PF05986 ADAM_spacer1 [ SRS ]    PF05986 ADAM_spacer1 [ Sanger ]    pfam05986 [ NCBI-CDD ]
Pfam	PF01562 Pep_M12B_propep [ SRS ]    PF01562 Pep_M12B_propep [ Sanger ]    pfam01562 [ NCBI-CDD ]
Pfam	PF01421 Reprolysin [ SRS ]    PF01421 Reprolysin [ Sanger ]    pfam01421 [ NCBI-CDD ]
Pfam	PF00090 TSP_1 [ SRS ]    PF00090 TSP_1 [ Sanger ]    pfam00090 [ NCBI-CDD ]
Smart	SM00209 TSP1 [EMBL]
Blocks	Q9UKP4
HPRD	05422
	Protein Interaction databases
DIP	Q9UKP4
IntAct	Q9UKP4
	Polymorphism : SNP, mutations, diseases
OMIM	605009    [ map ]
GENECLINICS	605009
SNP	ADAMTS7 [dbSNP-NCBI]
SNP	NM_014272 [SNP-NCI]
SNP	ADAMTS7 [GeneSNPs - Utah]  ADAMTS7] [HGBASE - SRS]
HAPMAP	ADAMTS7 [HAPMAP]
COSMIC	ADAMTS7 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	ADAMTS7
	General knowledge
Family Browser	ADAMTS7 [UCSC Family Browser]
SOURCE	NM_014272
SMD	Hs.16441
SAGE	Hs.16441
Enzyme	3.4.24.- [ Enzyme-SRS ]   3.4.24.- [ Brenda-SRS ]   3.4.24.- [ KEGG ]   3.4.24.- [ WIT ]
GO	metalloendopeptidase activity [Amigo]  metalloendopeptidase activity
GO	extracellular region [Amigo]  extracellular region
GO	proteinaceous extracellular matrix [Amigo]  proteinaceous extracellular matrix
GO	proteolysis [Amigo]  proteolysis
GO	integrin-mediated signaling pathway [Amigo]  integrin-mediated signaling pathway
GO	zinc ion binding [Amigo]  zinc ion binding
GO	metal ion binding [Amigo]  metal ion binding
PubGene	ADAMTS7
	Other databases
	Probes
Probe	ADAMTS7 Related clones (RZPD - Berlin)
	PubMed
PubMed	4 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

BiblioGene - INIST
Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu Apr 17 08:39:18 2008