AMACR (alpha-methylacyl-CoA racemase)

Identity

Other names	RACE
HGNC	AMACR
Location	5p13.2-q11.1
Location_base_pair	Starts at 34023657 and ends at 34043963 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	AMACR   451
Entrez_Gene	AMACR  23600  alpha-methylacyl-CoA racemase
	Cards
GeneCards	AMACR
Ensembl	AMACR [Search_View]   ENSG00000082196 [Gene_View]
Genatlas	AMACR
GeneLynx	AMACR
eGenome	AMACR
euGene	23600
	Genomic and cartography
GoldenPath	AMACR  -     chr5:34023657-34043963 -  5p13.3   [Description]    (hg18-March_2006)
Ensembl	AMACR - 5p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	AMACR
	Gene and transcription
Genbank	AF047020 [ ENTREZ ]
Genbank	AF158378 [ ENTREZ ]
Genbank	AJ130733 [ ENTREZ ]
Genbank	AK000912 [ ENTREZ ]
Genbank	AK022765 [ ENTREZ ]
RefSeq	NM_014324 [ SRS ]    NM_014324 [ ENTREZ ]
RefSeq	NM_203382 [ SRS ]    NM_203382 [ ENTREZ ]
RefSeq	AC_000048 [ SRS ]    AC_000048 [ ENTREZ ]
RefSeq	AC_000137 [ SRS ]    AC_000137 [ ENTREZ ]
RefSeq	NC_000005 [ SRS ]    NC_000005 [ ENTREZ ]
RefSeq	NT_006576 [ SRS ]    NT_006576 [ ENTREZ ]
RefSeq	NW_001838929 [ SRS ]    NW_001838929 [ ENTREZ ]
RefSeq	NW_922562 [ SRS ]    NW_922562 [ ENTREZ ]
AceView	AMACR AceView - NCBI
Unigene	Hs.508343 [ SRS ]    Hs.508343 [ NCBI ]     HS508343 [ spliceNest ]
Fast-db	2293 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q3KT79 [ SRS]    Q3KT79 [ EXPASY ]     Q3KT79 [ INTERPRO ]     Q3KT79 [ UNIPROT ]
Prosite	PS00687 ALDEHYDE_DEHYDR_GLU [ SRS ]    PS00687 ALDEHYDE_DEHYDR_GLU [ Expasy ]
Interpro	IPR016160 Ald_DHase_CS [ SRS ]    IPR016160 Ald_DHase_CS [ EBI ]
Interpro	IPR003673 CoA-Trfase_fam_III [ SRS ]    IPR003673 CoA-Trfase_fam_III [ EBI ]
CluSTr	Q3KT79
Pfam	PF02515 CoA_transf_3 [ SRS ]    PF02515 CoA_transf_3 [ Sanger ]    pfam02515 [ NCBI-CDD ]
Blocks	Q3KT79
HPRD	05134
	Protein Interaction databases
DIP	Q3KT79
IntAct	Q3KT79
	Polymorphism : SNP, mutations, diseases
OMIM	604489    [ map ]
GENECLINICS	604489
SNP	AMACR [dbSNP-NCBI]
SNP	NM_014324 [SNP-NCI]
SNP	NM_203382 [SNP-NCI]
SNP	AMACR [GeneSNPs - Utah]  AMACR] [HGBASE - SRS]
HAPMAP	AMACR [HAPMAP]
HGMD	AMACR
	General knowledge
Family Browser	AMACR [UCSC Family Browser]
SOURCE	NM_014324
SOURCE	NM_203382
SMD	Hs.508343
SAGE	Hs.508343
GO	catalytic activity [Amigo]  catalytic activity
GO	mitochondrion [Amigo]  mitochondrion
GO	peroxisome [Amigo]  peroxisome
GO	alpha-methylacyl-CoA racemase activity [Amigo]  alpha-methylacyl-CoA racemase activity
GO	metabolic process [Amigo]  metabolic process
GO	oxidoreductase activity [Amigo]  oxidoreductase activity
GO	isomerase activity [Amigo]  isomerase activity
PubGene	AMACR
TreeFam	AMACR
CTD	23600 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	AMACR Related clones (RZPD - Berlin)
	PubMed
PubMed	41 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:02:49 2008