ANKRD30A (ankyrin repeat domain 30A)

Identity

Other names	NY-BR-1
HGNC	ANKRD30A
Location	10p11.21
Location_base_pair	Starts at 37454791 and ends at 37561501 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	ANKRD30A   17234
Entrez_Gene	ANKRD30A  91074  ankyrin repeat domain 30A
	Cards
GeneCards	ANKRD30A
Ensembl	ANKRD30A [Search_View]   ENSG00000148513 [Gene_View]
Genatlas	ANKRD30A
GeneLynx	ANKRD30A
eGenome	ANKRD30A
euGene	91074
	Genomic and cartography
GoldenPath	ANKRD30A  -  10p11.21   chr10:37454791-37561501 +  10p11.21   [Description]    (hg18-March_2006)
Ensembl	ANKRD30A - 10p11.21 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ANKRD30A
	Gene and transcription
Genbank	AF269087 [ ENTREZ ]
Genbank	BP312910 [ ENTREZ ]
Genbank	DN831985 [ ENTREZ ]
RefSeq	NM_052997 [ SRS ]    NM_052997 [ ENTREZ ]
RefSeq	AC_000053 [ SRS ]    AC_000053 [ ENTREZ ]
RefSeq	AC_000142 [ SRS ]    AC_000142 [ ENTREZ ]
RefSeq	NC_000010 [ SRS ]    NC_000010 [ ENTREZ ]
RefSeq	NT_008705 [ SRS ]    NT_008705 [ ENTREZ ]
RefSeq	NW_001837932 [ SRS ]    NW_001837932 [ ENTREZ ]
RefSeq	NW_924584 [ SRS ]    NW_924584 [ ENTREZ ]
AceView	ANKRD30A AceView - NCBI
Unigene	Hs.373787 [ SRS ]    Hs.373787 [ NCBI ]     HS373787 [ spliceNest ]
Fast-db	8956 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9BXX3 [ SRS]    Q9BXX3 [ EXPASY ]     Q9BXX3 [ INTERPRO ]     Q9BXX3 [ UNIPROT ]
Prosite	PS50297 ANK_REP_REGION [ SRS ]    PS50297 ANK_REP_REGION [ Expasy ]
Prosite	PS50088 ANK_REPEAT [ SRS ]    PS50088 ANK_REPEAT [ Expasy ]
Interpro	IPR002110 ANK [ SRS ]    IPR002110 ANK [ EBI ]
Interpro	IPR001969 Pept_Asp_AS [ SRS ]    IPR001969 Pept_Asp_AS [ EBI ]
CluSTr	Q9BXX3
Pfam	PF00023 Ank [ SRS ]    PF00023 Ank [ Sanger ]    pfam00023 [ NCBI-CDD ]
Smart	SM00248 ANK [EMBL]
Blocks	Q9BXX3
HPRD	10125
	Protein Interaction databases
DIP	Q9BXX3
IntAct	Q9BXX3
	Polymorphism : SNP, mutations, diseases
OMIM	610856    [ map ]
GENECLINICS	610856
SNP	ANKRD30A [dbSNP-NCBI]
SNP	NM_052997 [SNP-NCI]
SNP	ANKRD30A [GeneSNPs - Utah]  ANKRD30A] [HGBASE - SRS]
HAPMAP	ANKRD30A [HAPMAP]
HGMD	ANKRD30A
	General knowledge
Family Browser	ANKRD30A [UCSC Family Browser]
SOURCE	NM_052997
SMD	Hs.373787
SAGE	Hs.373787
GO	transcription factor activity [Amigo]  transcription factor activity
GO	aspartic-type endopeptidase activity [Amigo]  aspartic-type endopeptidase activity
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	proteolysis [Amigo]  proteolysis
PubGene	ANKRD30A
TreeFam	ANKRD30A
CTD	91074 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ANKRD30A Related clones (RZPD - Berlin)
	PubMed
PubMed	8 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:30:30 2008