AOC3 (amine oxidase, copper containing 3 (vascular adhesion protein 1))

Identity

Other names	HPAO
	SSAO
	VAP-1
	VAP1
HGNC	AOC3
Location	17q21
Location_base_pair	Starts at 38256727 and ends at 38263666 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	AOC3   550
Entrez_Gene	AOC3  8639  amine oxidase, copper containing 3 (vascular adhesion protein 1)
	Cards
GeneCards	AOC3
Ensembl	ENSG00000131471 [Gene_View]  AOC3 [Vega]
Genatlas	AOC3
	Genomic and cartography
GoldenPath	AOC3  -  17q21   chr17:38256727-38263666 +  17q21.31   [Description]    (hg18-March_2006)
Ensembl	AOC3 - 17q21.31 [CytoView]
NCBI	Mapview
OMIM	603735 Disease map [OMIM]
HomoloGene	AOC3
	Gene and transcription
Genbank	AF054985 [ ENTREZ ]
Genbank	AF067406 [ ENTREZ ]
Genbank	AK025727 [ ENTREZ ]
Genbank	AK315129 [ ENTREZ ]
Genbank	BC036368 [ ENTREZ ]
RefSeq	NM_003734 [ SRS ]    NM_003734 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010755 [ SRS ]    NT_010755 [ ENTREZ ]
RefSeq	NW_001838436 [ SRS ]    NW_001838436 [ ENTREZ ]
RefSeq	NW_926828 [ SRS ]    NW_926828 [ ENTREZ ]
CCDS	AOC3 CCDS - NCBI
AceView	AOC3 AceView - NCBI
Unigene	Hs.198241 [ SRS ]    Hs.198241 [ NCBI ]
Fast-db	10832 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q16853 [ SRS]    Q16853 [ EXPASY ]     Q16853 [ INTERPRO ]     Q16853 [ UNIPROT ] Q16853 [ VarSplice FASTA ]
Prosite	PS01164 COPPER_AMINE_OXID_1 [ SRS ]    PS01164 COPPER_AMINE_OXID_1 [ Expasy ]
Prosite	PS01165 COPPER_AMINE_OXID_2 [ SRS ]    PS01165 COPPER_AMINE_OXID_2 [ Expasy ]
Interpro	IPR000269 Cu_amine_oxidase [ SRS ]    IPR000269 Cu_amine_oxidase [ EBI ]
Interpro	IPR015798 Cu_amine_oxidase_C [ SRS ]    IPR015798 Cu_amine_oxidase_C [ EBI ]
Interpro	IPR015800 Cu_amine_oxidase_N2 [ SRS ]    IPR015800 Cu_amine_oxidase_N2 [ EBI ]
Interpro	IPR015801 Cu_amine_oxidase_N2/3 [ SRS ]    IPR015801 Cu_amine_oxidase_N2/3 [ EBI ]
Interpro	IPR015802 Cu_amine_oxidase_N3 [ SRS ]    IPR015802 Cu_amine_oxidase_N3 [ EBI ]
CluSTr	Q16853
Pfam	PF01179 Cu_amine_oxid [ SRS ]    PF01179 Cu_amine_oxid [ Sanger ]    pfam01179 [ NCBI-CDD ]
Pfam	PF02727 Cu_amine_oxidN2 [ SRS ]    PF02727 Cu_amine_oxidN2 [ Sanger ]    pfam02727 [ NCBI-CDD ]
Pfam	PF02728 Cu_amine_oxidN3 [ SRS ]    PF02728 Cu_amine_oxidN3 [ Sanger ]    pfam02728 [ NCBI-CDD ]
Blocks	Q16853
PDB	1PU4 [ SRS ]    1PU4 [ PdbSum ],   1PU4 [ IMB ]   1PU4 [ RSDB ]
PDB	1US1 [ SRS ]    1US1 [ PdbSum ],   1US1 [ IMB ]   1US1 [ RSDB ]
PDB	2C10 [ SRS ]    2C10 [ PdbSum ],   2C10 [ IMB ]   2C10 [ RSDB ]
PDB	2C11 [ SRS ]    2C11 [ PdbSum ],   2C11 [ IMB ]   2C11 [ RSDB ]
HPRD	04770
	Protein Interaction databases
DIP	Q16853
IntAct	Q16853
	Polymorphism : SNP, mutations, diseases
OMIM	603735    [ map ]
GENETests	603735
SNP	AOC3 [dbSNP-NCBI]
SNP	NM_003734 [SNP-NCI]
SNP	AOC3 [GeneSNPs - Utah]  AOC3] [HGBASE - SRS]
HAPMAP	AOC3 [HAPMAP]
HGMD	AOC3
Genetic Association	AOC3
CDC HuGE	AOC3
	General knowledge
Family Browser	AOC3 [UCSC Family Browser]
SOURCE	NM_003734
SMD	Hs.198241
SAGE	Hs.198241
Enzyme	1.4.3.6 [ Enzyme-Expasy ]   1.4.3.6 [ Enzyme-SRS ]   1.4.3.6 [ IntEnz-EBI ]   1.4.3.6 [ BRENDA ]   1.4.3.6 [ KEGG ]
GO	copper ion binding [Amigo]  copper ion binding
GO	calcium ion binding [Amigo]  calcium ion binding
GO	protein binding [Amigo]  protein binding
GO	plasma membrane [Amigo]  plasma membrane
GO	inflammatory response [Amigo]  inflammatory response
GO	cell adhesion [Amigo]  cell adhesion
GO	amine oxidase activity [Amigo]  amine oxidase activity
GO	amine metabolic process [Amigo]  amine metabolic process
GO	amine metabolic process [Amigo]  amine metabolic process
GO	cell surface [Amigo]  cell surface
GO	integral to membrane [Amigo]  integral to membrane
GO	oxidoreductase activity [Amigo]  oxidoreductase activity
GO	protein homodimerization activity [Amigo]  protein homodimerization activity
GO	quinone binding [Amigo]  quinone binding
GO	oxidation reduction [Amigo]  oxidation reduction
KEGG	Glycine, serine and threonine metabolism
KEGG	Arginine and proline metabolism
KEGG	Histidine metabolism
KEGG	Tyrosine metabolism
KEGG	Phenylalanine metabolism
KEGG	Tryptophan metabolism
KEGG	beta-Alanine metabolism
KEGG	Alkaloid biosynthesis II
PubGene	AOC3
TreeFam	AOC3
CTD	8639 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	AOC3 Related clones (RZPD - Berlin)
	PubMed
PubMed	32 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu Nov 27 13:34:08 2008