ATP2A3 (ATPase, Ca++ transporting, ubiquitous)

Identity

Other names	SERCA3
HGNC	ATP2A3
Location	17p13.3
Location_base_pair	Starts at 3773918 and ends at 3814485 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	ATP2A3   813
Entrez_Gene	ATP2A3  489  ATPase, Ca++ transporting, ubiquitous
	Cards
GeneCards	ATP2A3
Ensembl	ATP2A3 [Search_View]   ENSG00000074370 [Gene_View]
Genatlas	ATP2A3
GeneLynx	ATP2A3
eGenome	ATP2A3
euGene	489
	Genomic and cartography
GoldenPath	ATP2A3  -  17p13.3   chr17:3773918-3814485 -  17p13.2   [Description]    (hg18-March_2006)
Ensembl	ATP2A3 - 17p13.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ATP2A3
	Gene and transcription
Genbank	AF068220 [ ENTREZ ]
Genbank	AF068221 [ ENTREZ ]
Genbank	AF458228 [ ENTREZ ]
Genbank	AF458229 [ ENTREZ ]
Genbank	AK292716 [ ENTREZ ]
RefSeq	NM_005173 [ SRS ]    NM_005173 [ ENTREZ ]
RefSeq	NM_174953 [ SRS ]    NM_174953 [ ENTREZ ]
RefSeq	NM_174954 [ SRS ]    NM_174954 [ ENTREZ ]
RefSeq	NM_174955 [ SRS ]    NM_174955 [ ENTREZ ]
RefSeq	NM_174956 [ SRS ]    NM_174956 [ ENTREZ ]
RefSeq	NM_174957 [ SRS ]    NM_174957 [ ENTREZ ]
RefSeq	NM_174958 [ SRS ]    NM_174958 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010718 [ SRS ]    NT_010718 [ ENTREZ ]
RefSeq	NW_001838403 [ SRS ]    NW_001838403 [ ENTREZ ]
RefSeq	NW_926584 [ SRS ]    NW_926584 [ ENTREZ ]
AceView	ATP2A3 AceView - NCBI
Unigene	Hs.513870 [ SRS ]    Hs.513870 [ NCBI ]     HS513870 [ spliceNest ]
Fast-db	1324 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q6JHX1 [ SRS]    Q6JHX1 [ EXPASY ]     Q6JHX1 [ INTERPRO ]     Q6JHX1 [ UNIPROT ]
Interpro	IPR001757 ATPase_P [ SRS ]    IPR001757 ATPase_P [ EBI ]
Interpro	IPR006068 ATPase_P_cat_C [ SRS ]    IPR006068 ATPase_P_cat_C [ EBI ]
CluSTr	Q6JHX1
Pfam	PF00689 Cation_ATPase_C [ SRS ]    PF00689 Cation_ATPase_C [ Sanger ]    pfam00689 [ NCBI-CDD ]
Blocks	Q6JHX1
HPRD	03568
	Protein Interaction databases
DIP	Q6JHX1
IntAct	Q6JHX1
	Polymorphism : SNP, mutations, diseases
OMIM	601929    [ map ]
GENECLINICS	601929
SNP	ATP2A3 [dbSNP-NCBI]
SNP	NM_005173 [SNP-NCI]
SNP	NM_174953 [SNP-NCI]
SNP	NM_174954 [SNP-NCI]
SNP	NM_174955 [SNP-NCI]
SNP	NM_174956 [SNP-NCI]
SNP	NM_174957 [SNP-NCI]
SNP	NM_174958 [SNP-NCI]
SNP	ATP2A3 [GeneSNPs - Utah]  ATP2A3] [HGBASE - SRS]
HAPMAP	ATP2A3 [HAPMAP]
HGMD	ATP2A3
	General knowledge
Family Browser	ATP2A3 [UCSC Family Browser]
SOURCE	NM_005173
SOURCE	NM_174953
SOURCE	NM_174954
SOURCE	NM_174955
SOURCE	NM_174956
SOURCE	NM_174957
SOURCE	NM_174958
SMD	Hs.513870
SAGE	Hs.513870
GO	nucleotide binding [Amigo]  nucleotide binding
GO	magnesium ion binding [Amigo]  magnesium ion binding
GO	calcium-transporting ATPase activity [Amigo]  calcium-transporting ATPase activity
GO	calcium ion binding [Amigo]  calcium ion binding
GO	protein binding [Amigo]  protein binding
GO	ATP binding [Amigo]  ATP binding
GO	nucleus [Amigo]  nucleus
GO	transport [Amigo]  transport
GO	cation transport [Amigo]  cation transport
GO	calcium ion transport [Amigo]  calcium ion transport
GO	metabolic process [Amigo]  metabolic process
GO	ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Amigo]  ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
GO	proton transport [Amigo]  proton transport
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	hydrolase activity [Amigo]  hydrolase activity
GO	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Amigo]  hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO	nuclear membrane [Amigo]  nuclear membrane
GO	sarcoplasmic reticulum membrane [Amigo]  sarcoplasmic reticulum membrane
KEGG	Calcium signaling pathway
PubGene	ATP2A3
TreeFam	ATP2A3
CTD	489 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ATP2A3 Related clones (RZPD - Berlin)
	PubMed
PubMed	22 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:31:37 2008