ATP2B2 (ATPase, Ca++ transporting, plasma membrane 2)

Identity

Other names	PMCA2
	PMCA2a
	PMCA2i
HGNC	ATP2B2
Location	3p25.3
Location_base_pair	Starts at 10340707 and ends at 10522268 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	ATP2B2   815
Entrez_Gene	ATP2B2  491  ATPase, Ca++ transporting, plasma membrane 2
	Cards
GeneCards	ATP2B2
Ensembl	ATP2B2 [Search_View]   ENSG00000157087 [Gene_View]
Genatlas	ATP2B2
GeneLynx	ATP2B2
eGenome	ATP2B2
euGene	491
	Genomic and cartography
GoldenPath	ATP2B2  -  3p25.3   chr3:10340707-10522268 -  3p25.3   [Description]    (hg18-March_2006)
Ensembl	ATP2B2 - 3p25.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ATP2B2
	Gene and transcription
Genbank	AA197323 [ ENTREZ ]
Genbank	AB210008 [ ENTREZ ]
Genbank	AK308898 [ ENTREZ ]
Genbank	AL134596 [ ENTREZ ]
Genbank	BC019853 [ ENTREZ ]
RefSeq	NM_001001331 [ SRS ]    NM_001001331 [ ENTREZ ]
RefSeq	NM_001683 [ SRS ]    NM_001683 [ ENTREZ ]
RefSeq	AC_000046 [ SRS ]    AC_000046 [ ENTREZ ]
RefSeq	AC_000135 [ SRS ]    AC_000135 [ ENTREZ ]
RefSeq	NC_000003 [ SRS ]    NC_000003 [ ENTREZ ]
RefSeq	NT_022517 [ SRS ]    NT_022517 [ ENTREZ ]
RefSeq	NW_001838877 [ SRS ]    NW_001838877 [ ENTREZ ]
RefSeq	NW_921651 [ SRS ]    NW_921651 [ ENTREZ ]
AceView	ATP2B2 AceView - NCBI
Unigene	Hs.268942 [ SRS ]    Hs.268942 [ NCBI ]     HS268942 [ spliceNest ]
Fast-db	2006 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q01814 [ SRS]    Q01814 [ EXPASY ]     Q01814 [ INTERPRO ]     Q01814 [ UNIPROT ]
Prosite	PS00154 ATPASE_E1_E2 [ SRS ]    PS00154 ATPASE_E1_E2 [ Expasy ]
Interpro	IPR006408 ATPase-IIB_Ca [ SRS ]    IPR006408 ATPase-IIB_Ca [ EBI ]
Interpro	IPR006069 ATPase_cat_a [ SRS ]    IPR006069 ATPase_cat_a [ EBI ]
Interpro	IPR001757 ATPase_P [ SRS ]    IPR001757 ATPase_P [ EBI ]
Interpro	IPR006068 ATPase_P_cat_C [ SRS ]    IPR006068 ATPase_P_cat_C [ EBI ]
Interpro	IPR004014 ATPase_P_cat_N [ SRS ]    IPR004014 ATPase_P_cat_N [ EBI ]
Interpro	IPR005834 Dehalogen-like_hydro [ SRS ]    IPR005834 Dehalogen-like_hydro [ EBI ]
Interpro	IPR008250 E1-E2_ATPase_reg [ SRS ]    IPR008250 E1-E2_ATPase_reg [ EBI ]
CluSTr	Q01814
Pfam	PF00689 Cation_ATPase_C [ SRS ]    PF00689 Cation_ATPase_C [ Sanger ]    pfam00689 [ NCBI-CDD ]
Pfam	PF00690 Cation_ATPase_N [ SRS ]    PF00690 Cation_ATPase_N [ Sanger ]    pfam00690 [ NCBI-CDD ]
Pfam	PF00122 E1-E2_ATPase [ SRS ]    PF00122 E1-E2_ATPase [ Sanger ]    pfam00122 [ NCBI-CDD ]
Pfam	PF00702 Hydrolase [ SRS ]    PF00702 Hydrolase [ Sanger ]    pfam00702 [ NCBI-CDD ]
Blocks	Q01814
HPRD	00160
	Protein Interaction databases
DIP	Q01814
IntAct	Q01814
	Polymorphism : SNP, mutations, diseases
OMIM	108733;601386    [ map ]
GENECLINICS	108733;601386
SNP	ATP2B2 [dbSNP-NCBI]
SNP	NM_001001331 [SNP-NCI]
SNP	NM_001683 [SNP-NCI]
SNP	ATP2B2 [GeneSNPs - Utah]  ATP2B2] [HGBASE - SRS]
HAPMAP	ATP2B2 [HAPMAP]
HGMD	ATP2B2
	General knowledge
Family Browser	ATP2B2 [UCSC Family Browser]
SOURCE	NM_001001331
SOURCE	NM_001683
SMD	Hs.268942
SAGE	Hs.268942
Enzyme	3.6.3.8 [ Enzyme-Expasy ]   3.6.3.8 [ Enzyme-SRS ]   3.6.3.8 [ IntEnz-EBI ]   3.6.3.8 [ BRENDA ]   3.6.3.8 [ KEGG ]   3.6.3.8 [ WIT ]
GO	nucleotide binding [Amigo]  nucleotide binding
GO	magnesium ion binding [Amigo]  magnesium ion binding
GO	calcium-transporting ATPase activity [Amigo]  calcium-transporting ATPase activity
GO	calcium ion binding [Amigo]  calcium ion binding
GO	calmodulin binding [Amigo]  calmodulin binding
GO	ATP binding [Amigo]  ATP binding
GO	cytoplasm [Amigo]  cytoplasm
GO	plasma membrane [Amigo]  plasma membrane
GO	cation transport [Amigo]  cation transport
GO	calcium ion transport [Amigo]  calcium ion transport
GO	sensory perception of sound [Amigo]  sensory perception of sound
GO	metabolic process [Amigo]  metabolic process
GO	integral to membrane [Amigo]  integral to membrane
GO	hydrolase activity [Amigo]  hydrolase activity
GO	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Amigo]  hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO	neuron differentiation [Amigo]  neuron differentiation
KEGG	Calcium signaling pathway
PubGene	ATP2B2
TreeFam	ATP2B2
CTD	491 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ATP2B2 Related clones (RZPD - Berlin)
	PubMed
PubMed	27 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:31:38 2008