ATP6V1C1 (ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1)

Identity

Other names	ATP6C
	ATP6D
	FLJ20057
	VATC
	Vma5
HGNC	ATP6V1C1
Location	8p22-q21.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	ATP6V1C1   856
Entrez_Gene	ATP6V1C1  528  ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
	Cards
GeneCards	ATP6V1C1
Ensembl	ATP6V1C1 [Search_View]   ENSG00000155097 [Gene_View]
Genatlas	ATP6V1C1
GeneLynx	ATP6V1C1
eGenome	ATP6V1C1
euGene	528
	Genomic and cartography
GoldenPath	ATP6V1C1  -     chr8:104102424-104154461 +  8q22.3   [Description]    (hg18-March_2006)
Ensembl	ATP6V1C1 - 8q22.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	ATP6V1C1
	Gene and transcription
Genbank	AA242944 [ ENTREZ ]
Genbank	AK000064 [ ENTREZ ]
Genbank	AK090702 [ ENTREZ ]
Genbank	AK308632 [ ENTREZ ]
Genbank	AL707882 [ ENTREZ ]
RefSeq	NM_001695 [ SRS ]    NM_001695 [ ENTREZ ]
RefSeq	AC_000051 [ SRS ]    AC_000051 [ ENTREZ ]
RefSeq	AC_000140 [ SRS ]    AC_000140 [ ENTREZ ]
RefSeq	NC_000008 [ SRS ]    NC_000008 [ ENTREZ ]
RefSeq	NT_008046 [ SRS ]    NT_008046 [ ENTREZ ]
RefSeq	NW_001839136 [ SRS ]    NW_001839136 [ ENTREZ ]
RefSeq	NW_923984 [ SRS ]    NW_923984 [ ENTREZ ]
AceView	ATP6V1C1 AceView - NCBI
Unigene	Hs.86905 [ SRS ]    Hs.86905 [ NCBI ]     HS86905 [ spliceNest ]
Fast-db	7595 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P21283 [ SRS]    P21283 [ EXPASY ]     P21283 [ INTERPRO ]     P21283 [ UNIPROT ]
Interpro	IPR004907 ATPase_V1_c [ SRS ]    IPR004907 ATPase_V1_c [ EBI ]
CluSTr	P21283
Pfam	PF03223 V-ATPase_C [ SRS ]    PF03223 V-ATPase_C [ Sanger ]    pfam03223 [ NCBI-CDD ]
Blocks	P21283
HPRD	04371
	Protein Interaction databases
DIP	P21283
IntAct	P21283
	Polymorphism : SNP, mutations, diseases
OMIM	603097    [ map ]
GENECLINICS	603097
SNP	ATP6V1C1 [dbSNP-NCBI]
SNP	NM_001695 [SNP-NCI]
SNP	ATP6V1C1 [GeneSNPs - Utah]  ATP6V1C1] [HGBASE - SRS]
HAPMAP	ATP6V1C1 [HAPMAP]
HGMD	ATP6V1C1
	General knowledge
Family Browser	ATP6V1C1 [UCSC Family Browser]
SOURCE	NM_001695
SMD	Hs.86905
SAGE	Hs.86905
Enzyme	3.6.3.14 [ Enzyme-Expasy ]   3.6.3.14 [ Enzyme-SRS ]   3.6.3.14 [ IntEnz-EBI ]   3.6.3.14 [ BRENDA ]   3.6.3.14 [ KEGG ]   3.6.3.14 [ WIT ]
GO	transporter activity [Amigo]  transporter activity
GO	protein binding [Amigo]  protein binding
GO	ATP binding [Amigo]  ATP binding
GO	ion transport [Amigo]  ion transport
GO	proton transport [Amigo]  proton transport
GO	proton-transporting two-sector ATPase complex [Amigo]  proton-transporting two-sector ATPase complex
GO	hydrolase activity [Amigo]  hydrolase activity
GO	hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Amigo]  hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO	hydrogen ion transporting ATPase activity, rotational mechanism [Amigo]  hydrogen ion transporting ATPase activity, rotational mechanism
KEGG	Oxidative phosphorylation
KEGG	ATP synthesis
KEGG	Epithelial cell signaling in Helicobacter pylori infection
PubGene	ATP6V1C1
TreeFam	ATP6V1C1
CTD	528 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	ATP6V1C1 Related clones (RZPD - Berlin)
	PubMed
PubMed	19 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:01:21 2008