B3GALT5 (UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5)

Identity

Other names	B3GalT-V
	B3GalTx
	B3T5
	GLCT5
	beta3Gal-T5
HGNC	B3GALT5
Location	21q22.3
Location_base_pair	Starts at 39951124 and ends at 39956685 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	B3GALT5   920
Entrez_Gene	B3GALT5  10317  UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5
	Cards
GeneCards	B3GALT5
Ensembl	B3GALT5 [Search_View]   ENSG00000183778 [Gene_View]
Genatlas	B3GALT5
GeneLynx	B3GALT5
eGenome	B3GALT5
euGene	10317
	Genomic and cartography
GoldenPath	B3GALT5  -  21q22.3   chr21:39951124-39956685 +  21q22.2   [Description]    (hg18-March_2006)
Ensembl	B3GALT5 - 21q22.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	B3GALT5
	Gene and transcription
Genbank	AB020337 [ ENTREZ ]
Genbank	AK292951 [ ENTREZ ]
Genbank	AY372061 [ ENTREZ ]
Genbank	BC104862 [ ENTREZ ]
Genbank	BC104864 [ ENTREZ ]
RefSeq	NM_006057 [ SRS ]    NM_006057 [ ENTREZ ]
RefSeq	NM_033170 [ SRS ]    NM_033170 [ ENTREZ ]
RefSeq	NM_033171 [ SRS ]    NM_033171 [ ENTREZ ]
RefSeq	NM_033172 [ SRS ]    NM_033172 [ ENTREZ ]
RefSeq	NM_033173 [ SRS ]    NM_033173 [ ENTREZ ]
RefSeq	AC_000064 [ SRS ]    AC_000064 [ ENTREZ ]
RefSeq	AC_000153 [ SRS ]    AC_000153 [ ENTREZ ]
RefSeq	NC_000021 [ SRS ]    NC_000021 [ ENTREZ ]
RefSeq	NT_011512 [ SRS ]    NT_011512 [ ENTREZ ]
RefSeq	NW_001838709 [ SRS ]    NW_001838709 [ ENTREZ ]
RefSeq	NW_927384 [ SRS ]    NW_927384 [ ENTREZ ]
AceView	B3GALT5 AceView - NCBI
Unigene	Hs.655094 [ SRS ]    Hs.655094 [ NCBI ]     HS655094 [ spliceNest ]
	Protein : pattern, domain, 3D structure
SwissProt	Q53Z19 [ SRS]    Q53Z19 [ EXPASY ]     Q53Z19 [ INTERPRO ]     Q53Z19 [ UNIPROT ]
Interpro	IPR002659 Glyco_trans_31 [ SRS ]    IPR002659 Glyco_trans_31 [ EBI ]
CluSTr	Q53Z19
Pfam	PF01762 Galactosyl_T [ SRS ]    PF01762 Galactosyl_T [ Sanger ]    pfam01762 [ NCBI-CDD ]
Blocks	Q53Z19
HPRD	06818
	Protein Interaction databases
DIP	Q53Z19
IntAct	Q53Z19
	Polymorphism : SNP, mutations, diseases
OMIM	604066    [ map ]
GENECLINICS	604066
SNP	B3GALT5 [dbSNP-NCBI]
SNP	NM_006057 [SNP-NCI]
SNP	NM_033170 [SNP-NCI]
SNP	NM_033171 [SNP-NCI]
SNP	NM_033172 [SNP-NCI]
SNP	NM_033173 [SNP-NCI]
SNP	B3GALT5 [GeneSNPs - Utah]  B3GALT5] [HGBASE - SRS]
HAPMAP	B3GALT5 [HAPMAP]
HGMD	B3GALT5
	General knowledge
Family Browser	B3GALT5 [UCSC Family Browser]
SOURCE	NM_006057
SOURCE	NM_033170
SOURCE	NM_033171
SOURCE	NM_033172
SOURCE	NM_033173
SMD	Hs.655094
SAGE	Hs.655094
GO	Golgi membrane [Amigo]  Golgi membrane
GO	endoplasmic reticulum [Amigo]  endoplasmic reticulum
GO	Golgi apparatus [Amigo]  Golgi apparatus
GO	protein amino acid glycosylation [Amigo]  protein amino acid glycosylation
GO	galactosyltransferase activity [Amigo]  galactosyltransferase activity
GO	UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity [Amigo]  UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	transferase activity, transferring glycosyl groups [Amigo]  transferase activity, transferring glycosyl groups
KEGG	Glycosphingolipid biosynthesis - lactoseries
KEGG	Glycosphingolipid biosynthesis - globoseries
KEGG	Glycan structures - biosynthesis 2
PubGene	B3GALT5
TreeFam	B3GALT5
CTD	10317 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	B3GALT5 Related clones (RZPD - Berlin)
	PubMed
PubMed	15 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:31:48 2008