B4GALNT3 (beta-1,4-N-acetyl-galactosaminyl transferase 3)

Identity

Other names	B4GalNac-T3
	FLJ16224
	FLJ40362
HGNC	B4GALNT3
Location	12p13.33
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	B4GALNT3   24137
Entrez_Gene	B4GALNT3  283358  beta-1,4-N-acetyl-galactosaminyl transferase 3
	Cards
GeneCards	B4GALNT3
Ensembl	B4GALNT3 [Search_View]   ENSG00000139044 [Gene_View]
Genatlas	B4GALNT3
GeneLynx	B4GALNT3
eGenome	B4GALNT3
euGene	283358
	Genomic and cartography
GoldenPath	B4GALNT3  -  12p13.33   chr12:439804-541319 +  12p13.33   [Description]    (hg18-March_2006)
Ensembl	B4GALNT3 - 12p13.33 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	B4GALNT3
	Gene and transcription
Genbank	AB089940 [ ENTREZ ]
Genbank	AK093503 [ ENTREZ ]
Genbank	AK097681 [ ENTREZ ]
Genbank	AK131277 [ ENTREZ ]
Genbank	BC156653 [ ENTREZ ]
RefSeq	NM_173593 [ SRS ]    NM_173593 [ ENTREZ ]
RefSeq	AC_000055 [ SRS ]    AC_000055 [ ENTREZ ]
RefSeq	AC_000144 [ SRS ]    AC_000144 [ ENTREZ ]
RefSeq	NC_000012 [ SRS ]    NC_000012 [ ENTREZ ]
RefSeq	NT_009759 [ SRS ]    NT_009759 [ ENTREZ ]
RefSeq	NW_001838049 [ SRS ]    NW_001838049 [ ENTREZ ]
RefSeq	NW_925295 [ SRS ]    NW_925295 [ ENTREZ ]
AceView	B4GALNT3 AceView - NCBI
Unigene	Hs.504416 [ SRS ]    Hs.504416 [ NCBI ]     HS504416 [ spliceNest ]
Fast-db	269 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q6L9W6 [ SRS]    Q6L9W6 [ EXPASY ]     Q6L9W6 [ INTERPRO ]     Q6L9W6 [ UNIPROT ]
Interpro	IPR008428 Chond_GalNAc [ SRS ]    IPR008428 Chond_GalNAc [ EBI ]
Interpro	IPR011658 PA14 [ SRS ]    IPR011658 PA14 [ EBI ]
CluSTr	Q6L9W6
Pfam	PF07691 PA14 [ SRS ]    PF07691 PA14 [ Sanger ]    pfam07691 [ NCBI-CDD ]
Smart	SM00758 PA14 [EMBL]
Blocks	Q6L9W6
HPRD	12514
	Protein Interaction databases
DIP	Q6L9W6
IntAct	Q6L9W6
	Polymorphism : SNP, mutations, diseases
OMIM	612220    [ map ]
GENECLINICS	612220
SNP	B4GALNT3 [dbSNP-NCBI]
SNP	NM_173593 [SNP-NCI]
SNP	B4GALNT3 [GeneSNPs - Utah]  B4GALNT3] [HGBASE - SRS]
HAPMAP	B4GALNT3 [HAPMAP]
HGMD	B4GALNT3
	General knowledge
Family Browser	B4GALNT3 [UCSC Family Browser]
SOURCE	NM_173593
SMD	Hs.504416
SAGE	Hs.504416
Enzyme	2.4.1.244 [ Enzyme-Expasy ]   2.4.1.244 [ Enzyme-SRS ]   2.4.1.244 [ IntEnz-EBI ]   2.4.1.244 [ BRENDA ]   2.4.1.244 [ KEGG ]   2.4.1.244 [ WIT ]
GO	Golgi apparatus [Amigo]  Golgi apparatus
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	transferase activity [Amigo]  transferase activity
GO	N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity [Amigo]  N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity
KEGG	Fructose and mannose metabolism
KEGG	Glycerolipid metabolism
KEGG	Glycan structures - biosynthesis 2
PubGene	B4GALNT3
TreeFam	B4GALNT3
CTD	283358 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	B4GALNT3 Related clones (RZPD - Berlin)
	PubMed
PubMed	6 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:01:30 2008