BHLHB2 (basic helix-loop-helix domain containing, class B, 2)

Identity

Other names	DEC1
	SHARP-2
	STRA13
	Stra14
HGNC	BHLHB2
Location	3p26
Location_base_pair	Starts at 4996208 and ends at 5001861 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	BHLHB2   1046
Entrez_Gene	BHLHB2  8553  basic helix-loop-helix domain containing, class B, 2
	Cards
GeneCards	BHLHB2
Ensembl	BHLHB2 [Search_View]   ENSG00000134107 [Gene_View]
Genatlas	BHLHB2
GeneLynx	BHLHB2
eGenome	BHLHB2
euGene	8553
	Genomic and cartography
GoldenPath	BHLHB2  -  3p26   chr3:4996208-5001861 +  3p26.2   [Description]    (hg18-March_2006)
Ensembl	BHLHB2 - 3p26.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	BHLHB2
	Gene and transcription
Genbank	AB004066 [ ENTREZ ]
Genbank	AK312509 [ ENTREZ ]
Genbank	BC068292 [ ENTREZ ]
Genbank	BC082238 [ ENTREZ ]
Genbank	CR456921 [ ENTREZ ]
RefSeq	NM_003670 [ SRS ]    NM_003670 [ ENTREZ ]
RefSeq	AC_000046 [ SRS ]    AC_000046 [ ENTREZ ]
RefSeq	AC_000135 [ SRS ]    AC_000135 [ ENTREZ ]
RefSeq	NC_000003 [ SRS ]    NC_000003 [ ENTREZ ]
RefSeq	NT_022517 [ SRS ]    NT_022517 [ ENTREZ ]
RefSeq	NW_001838876 [ SRS ]    NW_001838876 [ ENTREZ ]
RefSeq	NW_921651 [ SRS ]    NW_921651 [ ENTREZ ]
AceView	BHLHB2 AceView - NCBI
Unigene	Hs.171825 [ SRS ]    Hs.171825 [ NCBI ]     HS171825 [ spliceNest ]
Fast-db	980 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O14503 [ SRS]    O14503 [ EXPASY ]     O14503 [ INTERPRO ]     O14503 [ UNIPROT ]
Prosite	PS50888 HLH [ SRS ]    PS50888 HLH [ Expasy ]
Prosite	PS51054 ORANGE [ SRS ]    PS51054 ORANGE [ Expasy ]
Interpro	IPR001092 HLH_basic [ SRS ]    IPR001092 HLH_basic [ EBI ]
Interpro	IPR011598 HLH_DNA_bd [ SRS ]    IPR011598 HLH_DNA_bd [ EBI ]
Interpro	IPR003650 Orange [ SRS ]    IPR003650 Orange [ EBI ]
CluSTr	O14503
Pfam	PF07527 Hairy_orange [ SRS ]    PF07527 Hairy_orange [ Sanger ]    pfam07527 [ NCBI-CDD ]
Pfam	PF00010 HLH [ SRS ]    PF00010 HLH [ Sanger ]    pfam00010 [ NCBI-CDD ]
Smart	SM00353 HLH [EMBL]
Smart	SM00511 ORANGE [EMBL]
Blocks	O14503
HPRD	16050
	Protein Interaction databases
DIP	O14503
IntAct	O14503
	Polymorphism : SNP, mutations, diseases
OMIM	604256    [ map ]
GENECLINICS	604256
SNP	BHLHB2 [dbSNP-NCBI]
SNP	NM_003670 [SNP-NCI]
SNP	BHLHB2 [GeneSNPs - Utah]  BHLHB2] [HGBASE - SRS]
HAPMAP	BHLHB2 [HAPMAP]
HGMD	BHLHB2
	General knowledge
Family Browser	BHLHB2 [UCSC Family Browser]
SOURCE	NM_003670
SMD	Hs.171825
SAGE	Hs.171825
GO	transcription factor activity [Amigo]  transcription factor activity
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	entrainment of circadian clock [Amigo]  entrainment of circadian clock
GO	transcription repressor activity [Amigo]  transcription repressor activity
GO	negative regulation of transcription, DNA-dependent [Amigo]  negative regulation of transcription, DNA-dependent
GO	regulation of neuronal synaptic plasticity [Amigo]  regulation of neuronal synaptic plasticity
KEGG	Circadian rhythm
PubGene	BHLHB2
TreeFam	BHLHB2
CTD	8553 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	BHLHB2 Related clones (RZPD - Berlin)
	PubMed
PubMed	22 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:32:18 2008