Atlas of Genetics and Cytogenetics in Oncology and Haematology

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C18orf8 (chromosome 18 open reading frame 8)

Identity

Other namesFLJ23453
HsT2591
MIC1
HGNC (Hugo) C18orf8
Location 18q11.2
Location_base_pair Starts at 19337460 and ends at 19365742 bp from pter ( according to hg18-March_2006)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)C18orf8   24326
Entrez_Gene (NCBI)C18orf8  29919  chromosome 18 open reading frame 8
Cards
GeneCards (Weizmann)C18orf8
Ensembl (Hinxton)ENSG00000141452 [Gene_View]  C18orf8 [Vega]
AceView (NCBI)C18orf8
Genatlas (Paris)C18orf8
euGene (Indiana)29919
SOURCE (Stanford)NM_013326
Gene Expression (Array Express) ENSG00000141452
Genomic and cartography
GoldenPath (UCSC)C18orf8  -  18q11.2   chr18:19337460-19365742 +  18q11.2   [Description]    (hg18-March_2006)
EnsemblC18orf8 - 18q11.2 [CytoView]
Mapping of homologs : NCBIC18orf8 [Mapview]
OMIM
Gene and transcription
Gene : Genbank (Entrez)AF143536 AK027106 AK057192 AK294169 AK295246
Reference sequence (RefSeq transcript) :SRSNM_013326
Reference transcript : EntrezNM_013326
RefSeq genomic : SRSAC_000061 AC_000150 NC_000018 NT_010966 NW_001838467 NW_927095
RefSeq genomic : EntrezAC_000061 AC_000150 NC_000018 NT_010966 NW_001838467 NW_927095
Consensus coding sequences : CCDS NCBIC18orf8
Cluster EST : UnigeneHs.464779 [ SRS ] Hs.464779 [ NCBI ]
Alternative Splicing : Fast-db (Paris)2260
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtQ96DM3 (SRS) Q96DM3 (Expasy) Q96DM3 (Uniprot)
With graphics : InterProQ96DM3
Splice isoforms : VarSplice FASTAQ96DM3(VarSplice FASTA)
Domains : Interpro (SRS)Mic1   
Domains : Interpro (EBI)Mic1   
Related proteins : CluSTrQ96DM3
Domain families : Pfam SRSMic1 (PF07035)   
Domain families : Pfam SangerMic1 (PF07035)   
Domain families : Pfam NCBIpfam07035   
Blocks (Seattle)Q96DM3
Crystal structure of protein : PDB SRS
Crystal structure of protein : PDBSum
Crystal structure of protein : IMB
Crystal structure of protein : PDB RSDB
HPRD12693
Protein Interaction databases
DIP (DOE-UCLA)Q96DM3
IntAct (EBI)Q96DM3
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIC18orf8
SNP : GeneSNP UtahC18orf8
SNP : HGBaseC18orf8
Genetic variants : HAPMAPC18orf8
Mutations and Diseases : HGMDC18orf8
Hereditary diseases : OMIM
Hereditary diseases : GENETests
Diseases : Genetic AssociationC18orf8
General knowledge
Homologs : HomoloGeneC18orf8
Homology/Alignments : Family Browser UCSCC18orf8
Phylogenetic Trees/Animal Genes : TreeFamC18orf8
Chemical/Protein Interactions : CTD29919
Keywords Ontology : AmiGO
Keywords Ontology : EGO-EBI
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
Probes : ImagenesC18orf8 Related clones (RZPD - Berlin)
Literature
PubMed4 Pubmed reference(s) in Entrez
PubGeneC18orf8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2009Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 27 10:36:19 CET 2010
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