C7 (complement component 7)

Identity

Other names	-
HGNC	C7
Location	5p13
Location_base_pair	Starts at 40945356 and ends at 41018798 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	C7   1346
Entrez_Gene	C7  730  complement component 7
	Cards
GeneCards	C7
Ensembl	C7 [Search_View]   ENSG00000112936 [Gene_View]
Genatlas	C7
GeneLynx	C7
eGenome	C7
euGene	730
	Genomic and cartography
GoldenPath	C7  -  5p13   chr5:40945356-41018798 +  5p13.1   [Description]    (hg18-March_2006)
Ensembl	C7 - 5p13.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	C7
	Gene and transcription
Genbank	AK290349 [ ENTREZ ]
Genbank	AK312737 [ ENTREZ ]
Genbank	BC025402 [ ENTREZ ]
Genbank	BC041807 [ ENTREZ ]
Genbank	BC063851 [ ENTREZ ]
RefSeq	NM_000587 [ SRS ]    NM_000587 [ ENTREZ ]
RefSeq	AC_000048 [ SRS ]    AC_000048 [ ENTREZ ]
RefSeq	AC_000137 [ SRS ]    AC_000137 [ ENTREZ ]
RefSeq	NC_000005 [ SRS ]    NC_000005 [ ENTREZ ]
RefSeq	NT_006576 [ SRS ]    NT_006576 [ ENTREZ ]
RefSeq	NW_001838933 [ SRS ]    NW_001838933 [ ENTREZ ]
RefSeq	NW_922596 [ SRS ]    NW_922596 [ ENTREZ ]
AceView	C7 AceView - NCBI
Unigene	Hs.78065 [ SRS ]    Hs.78065 [ NCBI ]     HS78065 [ spliceNest ]
Fast-db	3226 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P10643 [ SRS]    P10643 [ EXPASY ]     P10643 [ INTERPRO ]     P10643 [ UNIPROT ]
Prosite	PS00022 EGF_1 [ SRS ]    PS00022 EGF_1 [ Expasy ]
Prosite	PS01186 EGF_2 [ SRS ]    PS01186 EGF_2 [ Expasy ]
Prosite	PS50026 EGF_3 [ SRS ]    PS50026 EGF_3 [ Expasy ]
Prosite	PS01209 LDLRA_1 [ SRS ]    PS01209 LDLRA_1 [ Expasy ]
Prosite	PS50068 LDLRA_2 [ SRS ]    PS50068 LDLRA_2 [ Expasy ]
Prosite	PS00279 MAC_PERFORIN [ SRS ]    PS00279 MAC_PERFORIN [ Expasy ]
Prosite	PS50923 SUSHI [ SRS ]    PS50923 SUSHI [ Expasy ]
Prosite	PS50092 TSP1 [ SRS ]    PS50092 TSP1 [ Expasy ]
Interpro	IPR016060 Complement_control_module [ SRS ]    IPR016060 Complement_control_module [ EBI ]
Interpro	IPR000742 EGF_3 [ SRS ]    IPR000742 EGF_3 [ EBI ]
Interpro	IPR013032 EGF_like_reg_CS [ SRS ]    IPR013032 EGF_like_reg_CS [ EBI ]
Interpro	IPR003884 FacI_MAC [ SRS ]    IPR003884 FacI_MAC [ EBI ]
Interpro	IPR002172 LDL_rcpt_classA_cys-rich [ SRS ]    IPR002172 LDL_rcpt_classA_cys-rich [ EBI ]
Interpro	IPR001862 MAC_perforin [ SRS ]    IPR001862 MAC_perforin [ EBI ]
Interpro	IPR000436 Sushi_SCR_CCP [ SRS ]    IPR000436 Sushi_SCR_CCP [ EBI ]
Interpro	IPR000884 TSP1 [ SRS ]    IPR000884 TSP1 [ EBI ]
Interpro	IPR008085 TSP_1 [ SRS ]    IPR008085 TSP_1 [ EBI ]
CluSTr	P10643
Pfam	PF00057 Ldl_recept_a [ SRS ]    PF00057 Ldl_recept_a [ Sanger ]    pfam00057 [ NCBI-CDD ]
Pfam	PF01823 MACPF [ SRS ]    PF01823 MACPF [ Sanger ]    pfam01823 [ NCBI-CDD ]
Pfam	PF00084 Sushi [ SRS ]    PF00084 Sushi [ Sanger ]    pfam00084 [ NCBI-CDD ]
Pfam	PF00090 TSP_1 [ SRS ]    PF00090 TSP_1 [ Sanger ]    pfam00090 [ NCBI-CDD ]
Smart	SM00032 CCP [EMBL]
Smart	SM00057 FIMAC [EMBL]
Smart	SM00192 LDLa [EMBL]
Smart	SM00457 MACPF [EMBL]
Smart	SM00209 TSP1 [EMBL]
Blocks	P10643
HPRD	01957
	Protein Interaction databases
DIP	P10643
IntAct	P10643
	Polymorphism : SNP, mutations, diseases
OMIM	217070;610102    [ map ]
GENECLINICS	217070;610102
SNP	C7 [dbSNP-NCBI]
SNP	NM_000587 [SNP-NCI]
SNP	C7 [GeneSNPs - Utah]  C7] [HGBASE - SRS]
HAPMAP	C7 [HAPMAP]
HGMD	C7
	General knowledge
Family Browser	C7 [UCSC Family Browser]
SOURCE	NM_000587
SMD	Hs.78065
SAGE	Hs.78065
GO	extracellular region [Amigo]  extracellular region
GO	extracellular region [Amigo]  extracellular region
GO	membrane attack complex [Amigo]  membrane attack complex
GO	complement activation, alternative pathway [Amigo]  complement activation, alternative pathway
GO	complement activation, classical pathway [Amigo]  complement activation, classical pathway
GO	cytolysis [Amigo]  cytolysis
BIOCARTA	Cells and Molecules involved in local acute inflammatory response    [Genes]
BIOCARTA	Alternative Complement Pathway    [Genes]
BIOCARTA	Classical Complement Pathway    [Genes]
BIOCARTA	Complement Pathway    [Genes]
BIOCARTA	Lectin Induced Complement Pathway    [Genes]
KEGG	Complement and coagulation cascades
PubGene	C7
TreeFam	C7
CTD	730 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	C7 Related clones (RZPD - Berlin)
	PubMed
PubMed	29 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:05:35 2008