CACNA1H (calcium channel, voltage-dependent, T type, alpha 1H subunit)

Identity

Other names	CACNA1HB
	Cav3.2
	EIG6
	FLJ90484
HGNC	CACNA1H
Location	16p13.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CACNA1H   1395
Entrez_Gene	CACNA1H  8912  calcium channel, voltage-dependent, T type, alpha 1H subunit
	Cards
GeneCards	CACNA1H
Ensembl	CACNA1H [Search_View]   ENSG00000127990 [Gene_View]
Genatlas	CACNA1H
GeneLynx	CACNA1H
eGenome	CACNA1H
euGene	8912
	Genomic and cartography
GoldenPath	CACNA1H  -  16p13.3   chr16:1143242-1211773 +  16p13.3   [Description]    (hg18-March_2006)
Ensembl	CACNA1H - 16p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CACNA1H
	Gene and transcription
Genbank	AF051946 [ ENTREZ ]
Genbank	AF070604 [ ENTREZ ]
Genbank	AF073931 [ ENTREZ ]
Genbank	AJ420779 [ ENTREZ ]
Genbank	AK074965 [ ENTREZ ]
RefSeq	NM_001005407 [ SRS ]    NM_001005407 [ ENTREZ ]
RefSeq	NM_021098 [ SRS ]    NM_021098 [ ENTREZ ]
RefSeq	AC_000059 [ SRS ]    AC_000059 [ ENTREZ ]
RefSeq	AC_000148 [ SRS ]    AC_000148 [ ENTREZ ]
RefSeq	NC_000016 [ SRS ]    NC_000016 [ ENTREZ ]
RefSeq	NT_037887 [ SRS ]    NT_037887 [ ENTREZ ]
RefSeq	NW_001838339 [ SRS ]    NW_001838339 [ ENTREZ ]
RefSeq	NW_926018 [ SRS ]    NW_926018 [ ENTREZ ]
AceView	CACNA1H AceView - NCBI
Unigene	Hs.459642 [ SRS ]    Hs.459642 [ NCBI ]     HS459642 [ spliceNest ]
Fast-db	1057 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O95180 [ SRS]    O95180 [ EXPASY ]     O95180 [ INTERPRO ]     O95180 [ UNIPROT ]
Interpro	IPR005821 Ion_trans [ SRS ]    IPR005821 Ion_trans [ EBI ]
Interpro	IPR005445 VDCC_T_a1su [ SRS ]    IPR005445 VDCC_T_a1su [ EBI ]
Interpro	IPR002077 VDCCAlpha1 [ SRS ]    IPR002077 VDCCAlpha1 [ EBI ]
CluSTr	O95180
Pfam	PF00520 Ion_trans [ SRS ]    PF00520 Ion_trans [ Sanger ]    pfam00520 [ NCBI-CDD ]
Blocks	O95180
HPRD	07442
	Protein Interaction databases
DIP	O95180
IntAct	O95180
	Polymorphism : SNP, mutations, diseases
OMIM	607904;611942    [ map ]
GENECLINICS	607904;611942
SNP	CACNA1H [dbSNP-NCBI]
SNP	NM_001005407 [SNP-NCI]
SNP	NM_021098 [SNP-NCI]
SNP	CACNA1H [GeneSNPs - Utah]  CACNA1H] [HGBASE - SRS]
HAPMAP	CACNA1H [HAPMAP]
HGMD	CACNA1H
	General knowledge
Family Browser	CACNA1H [UCSC Family Browser]
SOURCE	NM_001005407
SOURCE	NM_021098
SMD	Hs.459642
SAGE	Hs.459642
GO	voltage-gated ion channel activity [Amigo]  voltage-gated ion channel activity
GO	calcium ion binding [Amigo]  calcium ion binding
GO	voltage-gated calcium channel complex [Amigo]  voltage-gated calcium channel complex
GO	ion transport [Amigo]  ion transport
GO	calcium ion transport [Amigo]  calcium ion transport
GO	muscle contraction [Amigo]  muscle contraction
GO	muscle development [Amigo]  muscle development
GO	myoblast fusion [Amigo]  myoblast fusion
GO	regulation of heart contraction [Amigo]  regulation of heart contraction
GO	low voltage-gated calcium channel activity [Amigo]  low voltage-gated calcium channel activity
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
KEGG	MAPK signaling pathway
KEGG	Calcium signaling pathway
PubGene	CACNA1H
TreeFam	CACNA1H
CTD	8912 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CACNA1H Related clones (RZPD - Berlin)
	PubMed
PubMed	39 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:02:56 2008