CBFA2T2 (core-binding factor, runt domain, alpha subunit 2; translocated to, 2)

Identity

Other names	DKFZp313F2116
	EHT
	MTGR1
	ZMYND3
Hugo	CBFA2T2
Location	20q11
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	CBFA2T2
GDB	CBFA2T2
Entrez_Gene	CBFA2T2  9139  core-binding factor, runt domain, alpha subunit 2; translocated to, 2
	Cards
GeneCards	CBFA2T2
Ensembl	CBFA2T2 [Search_View]   ENSG00000078699 [Gene_View]
Genatlas	CBFA2T2
GeneLynx	CBFA2T2
eGenome	CBFA2T2
euGene	9139
	Genomic and cartography
GoldenPath	CBFA2T2  -  20q11   chr20:31613832-31701498 +  20q11.22   [Description]    (hg18-March_2006)
Ensembl	CBFA2T2 - 20q11.22 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CBFA2T2
	Gene and transcription
Genbank	AB209306 [ ENTREZ ]
Genbank	AF013970 [ ENTREZ ]
Genbank	AF039200 [ ENTREZ ]
Genbank	AF052210 [ ENTREZ ]
Genbank	AF052211 [ ENTREZ ]
RefSeq	NM_001032999 [ SRS ]    NM_001032999 [ ENTREZ ]
RefSeq	NM_001039709 [ SRS ]    NM_001039709 [ ENTREZ ]
RefSeq	NM_005093 [ SRS ]    NM_005093 [ ENTREZ ]
RefSeq	AC_000063 [ SRS ]    AC_000063 [ ENTREZ ]
RefSeq	AC_000152 [ SRS ]    AC_000152 [ ENTREZ ]
RefSeq	NC_000020 [ SRS ]    NC_000020 [ ENTREZ ]
RefSeq	NT_028392 [ SRS ]    NT_028392 [ ENTREZ ]
RefSeq	NW_001838664 [ SRS ]    NW_001838664 [ ENTREZ ]
RefSeq	NW_927339 [ SRS ]    NW_927339 [ ENTREZ ]
AceView	CBFA2T2 AceView - NCBI
Unigene	Hs.153934 [ SRS ]    Hs.153934 [ NCBI ]     HS153934 [ spliceNest ]
Fast-db	8348 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O43439 [ SRS]    O43439 [ EXPASY ]     O43439 [ INTERPRO ]
Prosite	PS51119 TAFH [ SRS ]    PS51119 TAFH [ Expasy ]
Prosite	PS01360 ZF_MYND_1 [ SRS ]    PS01360 ZF_MYND_1 [ Expasy ]
Prosite	PS50865 ZF_MYND_2 [ SRS ]    PS50865 ZF_MYND_2 [ Expasy ]
Interpro	IPR013289 ETO [ SRS ]    IPR013289 ETO [ EBI ]
Interpro	IPR013291 MTGR1 [ SRS ]    IPR013291 MTGR1 [ EBI ]
Interpro	IPR014896 NHR2 [ SRS ]    IPR014896 NHR2 [ EBI ]
Interpro	IPR003894 TAFH_NHR1 [ SRS ]    IPR003894 TAFH_NHR1 [ EBI ]
Interpro	IPR002893 Znf_MYND [ SRS ]    IPR002893 Znf_MYND [ EBI ]
CluSTr	O43439
Pfam	PF08788 NHR2 [ SRS ]    PF08788 NHR2 [ Sanger ]    pfam08788 [ NCBI-CDD ]
Pfam	PF07531 TAFH [ SRS ]    PF07531 TAFH [ Sanger ]    pfam07531 [ NCBI-CDD ]
Pfam	PF01753 zf-MYND [ SRS ]    PF01753 zf-MYND [ Sanger ]    pfam01753 [ NCBI-CDD ]
Smart	SM00549 TAFH [EMBL]
Blocks	O43439
PDB	CBFA2T2 [ SRS ]    CBFA2T2 [ PdbSum ],   CBFA2T2 [ IMB ]   CBFA2T2 [ RSDB ]
HPRD	04721
	Protein Interaction databases
DIP	O43439
IntAct	O43439
	Polymorphism : SNP, mutations, diseases
OMIM	603672    [ map ]
GENECLINICS	603672
SNP	CBFA2T2 [dbSNP-NCBI]
SNP	NM_001032999 [SNP-NCI]
SNP	NM_001039709 [SNP-NCI]
SNP	NM_005093 [SNP-NCI]
SNP	CBFA2T2 [GeneSNPs - Utah]  CBFA2T2] [HGBASE - SRS]
HAPMAP	CBFA2T2 [HAPMAP]
HGMD	CBFA2T2
	General knowledge
Family Browser	CBFA2T2 [UCSC Family Browser]
SOURCE	NM_001032999
SOURCE	NM_001039709
SOURCE	NM_005093
SMD	Hs.153934
SAGE	Hs.153934
GO	transcription factor activity [Amigo]  transcription factor activity
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	zinc ion binding [Amigo]  zinc ion binding
GO	cell proliferation [Amigo]  cell proliferation
GO	metal ion binding [Amigo]  metal ion binding
PubGene	CBFA2T2
TreeFam	CBFA2T2
CTD	9139 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CBFA2T2 Related clones (RZPD - Berlin)
	PubMed
PubMed	15 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Jul 14 17:00:42 2008