CCL19 (chemokine (C-C motif) ligand 19)

Identity

Other names	CKb11
	ELC
	MGC34433
	MIP-3b
	MIP3B
	SCYA19
HGNC	CCL19
Location	9p13
Location_base_pair	Starts at 34679567 and ends at 34681274 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CCL19   10617
Entrez_Gene	CCL19  6363  chemokine (C-C motif) ligand 19
	Cards
GeneCards	CCL19
Ensembl	CCL19 [Search_View]   ENSG00000172724 [Gene_View]
Genatlas	CCL19
GeneLynx	CCL19
eGenome	CCL19
euGene	6363
	Genomic and cartography
GoldenPath	CCL19  -  9p13   chr9:34679567-34681274 -  9p13.3   [Description]    (hg18-March_2006)
Ensembl	CCL19 - 9p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CCL19
	Gene and transcription
Genbank	AB000887 [ ENTREZ ]
Genbank	AK311945 [ ENTREZ ]
Genbank	BC027968 [ ENTREZ ]
Genbank	CR456868 [ ENTREZ ]
Genbank	CR623730 [ ENTREZ ]
RefSeq	NM_006274 [ SRS ]    NM_006274 [ ENTREZ ]
RefSeq	AC_000052 [ SRS ]    AC_000052 [ ENTREZ ]
RefSeq	AC_000141 [ SRS ]    AC_000141 [ ENTREZ ]
RefSeq	NC_000009 [ SRS ]    NC_000009 [ ENTREZ ]
RefSeq	NT_008413 [ SRS ]    NT_008413 [ ENTREZ ]
RefSeq	NW_001839149 [ SRS ]    NW_001839149 [ ENTREZ ]
RefSeq	NW_924062 [ SRS ]    NW_924062 [ ENTREZ ]
AceView	CCL19 AceView - NCBI
Unigene	Hs.50002 [ SRS ]    Hs.50002 [ NCBI ]     HS50002 [ spliceNest ]
Fast-db	5657 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q6IBD6 [ SRS]    Q6IBD6 [ EXPASY ]     Q6IBD6 [ INTERPRO ]     Q6IBD6 [ UNIPROT ]
Prosite	PS00472 SMALL_CYTOKINES_CC [ SRS ]    PS00472 SMALL_CYTOKINES_CC [ Expasy ]
Interpro	IPR000827 CC_chemkine_sml_CS [ SRS ]    IPR000827 CC_chemkine_sml_CS [ EBI ]
Interpro	IPR001811 Chemokine_IL8 [ SRS ]    IPR001811 Chemokine_IL8 [ EBI ]
CluSTr	Q6IBD6
Pfam	PF00048 IL8 [ SRS ]    PF00048 IL8 [ Sanger ]    pfam00048 [ NCBI-CDD ]
Smart	SM00199 SCY [EMBL]
Blocks	Q6IBD6
HPRD	03750
	Protein Interaction databases
DIP	Q6IBD6
IntAct	Q6IBD6
	Polymorphism : SNP, mutations, diseases
OMIM	602227    [ map ]
GENECLINICS	602227
SNP	CCL19 [dbSNP-NCBI]
SNP	NM_006274 [SNP-NCI]
SNP	CCL19 [GeneSNPs - Utah]  CCL19] [HGBASE - SRS]
HAPMAP	CCL19 [HAPMAP]
HGMD	CCL19
	General knowledge
Family Browser	CCL19 [UCSC Family Browser]
SOURCE	NM_006274
SMD	Hs.50002
SAGE	Hs.50002
GO	extracellular region [Amigo]  extracellular region
GO	extracellular space [Amigo]  extracellular space
GO	cellular calcium ion homeostasis [Amigo]  cellular calcium ion homeostasis
GO	chemotaxis [Amigo]  chemotaxis
GO	inflammatory response [Amigo]  inflammatory response
GO	immune response [Amigo]  immune response
GO	signal transduction [Amigo]  signal transduction
GO	chemokine activity [Amigo]  chemokine activity
GO	response to virus [Amigo]  response to virus
KEGG	Cytokine-cytokine receptor interaction
PubGene	CCL19
TreeFam	CCL19
CTD	6363 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CCL19 Related clones (RZPD - Berlin)
	PubMed
PubMed	36 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:06:17 2008