CD9 (CD9 molecule)

Identity

Other names	5H9
	BA2
	BTCC-1
	DRAP-27
	GIG2
	MIC3
	MRP-1
	P24
	TSPAN29
HGNC	CD9
Location	12p13.3
Location_base_pair	Starts at 6179816 and ends at 6217688 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CD9   1709
Entrez_Gene	CD9  928  CD9 molecule
	Cards
GeneCards	CD9
Ensembl	CD9 [Search_View]   ENSG00000010278 [Gene_View]
Genatlas	CD9
GeneLynx	CD9
eGenome	CD9
euGene	928
	Genomic and cartography
GoldenPath	CD9  -  12p13.3   chr12:6179816-6217688 +  12p13.31   [Description]    (hg18-March_2006)
Ensembl	CD9 - 12p13.31 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CD9
	Gene and transcription
Genbank	AB079244 [ ENTREZ ]
Genbank	AK298431 [ ENTREZ ]
Genbank	AK308700 [ ENTREZ ]
Genbank	AK311020 [ ENTREZ ]
Genbank	AK315219 [ ENTREZ ]
RefSeq	NM_001769 [ SRS ]    NM_001769 [ ENTREZ ]
RefSeq	AC_000055 [ SRS ]    AC_000055 [ ENTREZ ]
RefSeq	AC_000144 [ SRS ]    AC_000144 [ ENTREZ ]
RefSeq	NC_000012 [ SRS ]    NC_000012 [ ENTREZ ]
RefSeq	NT_009759 [ SRS ]    NT_009759 [ ENTREZ ]
RefSeq	NW_001838050 [ SRS ]    NW_001838050 [ ENTREZ ]
RefSeq	NW_925295 [ SRS ]    NW_925295 [ ENTREZ ]
AceView	CD9 AceView - NCBI
Unigene	Hs.114286 [ SRS ]    Hs.114286 [ NCBI ]     HS114286 [ spliceNest ]
Fast-db	909 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P21926 [ SRS]    P21926 [ EXPASY ]     P21926 [ INTERPRO ]     P21926 [ UNIPROT ]
Prosite	PS00421 TM4_1 [ SRS ]    PS00421 TM4_1 [ Expasy ]
Interpro	IPR000301 Transmem_4 [ SRS ]    IPR000301 Transmem_4 [ EBI ]
CluSTr	P21926
Pfam	PF00335 Tetraspannin [ SRS ]    PF00335 Tetraspannin [ Sanger ]    pfam00335 [ NCBI-CDD ]
Blocks	P21926
HPRD	00880
	Protein Interaction databases
DIP	P21926
IntAct	P21926
	Polymorphism : SNP, mutations, diseases
OMIM	143030    [ map ]
GENECLINICS	143030
SNP	CD9 [dbSNP-NCBI]
SNP	NM_001769 [SNP-NCI]
SNP	CD9 [GeneSNPs - Utah]  CD9] [HGBASE - SRS]
HAPMAP	CD9 [HAPMAP]
HGMD	CD9
	General knowledge
Family Browser	CD9 [UCSC Family Browser]
SOURCE	NM_001769
SMD	Hs.114286
SAGE	Hs.114286
GO	protein binding [Amigo]  protein binding
GO	plasma membrane [Amigo]  plasma membrane
GO	plasma membrane [Amigo]  plasma membrane
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	cell motility [Amigo]  cell motility
GO	cell adhesion [Amigo]  cell adhesion
GO	fusion of sperm to egg plasma membrane [Amigo]  fusion of sperm to egg plasma membrane
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	platelet activation [Amigo]  platelet activation
GO	paranodal junction assembly [Amigo]  paranodal junction assembly
GO	platelet alpha granule membrane [Amigo]  platelet alpha granule membrane
KEGG	Hematopoietic cell lineage
PubGene	CD9
TreeFam	CD9
CTD	928 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CD9 Related clones (RZPD - Berlin)
	PubMed
PubMed	86 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:34:31 2008