CDH12 (cadherin 12, type 2 (N-cadherin 2))

Identity

Other names	CDHB
	FLJ34857
HGNC	CDH12
Location	5p14.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CDH12   1751
Entrez_Gene	CDH12  1010  cadherin 12, type 2 (N-cadherin 2)
	Cards
GeneCards	CDH12
Ensembl	CDH12 [Search_View]   ENSG00000154162 [Gene_View]
Genatlas	CDH12
GeneLynx	CDH12
eGenome	CDH12
euGene	1010
	Genomic and cartography
GoldenPath	CDH12  -  5p14.3   chr5:21786911-22889488 -  5p14.3   [Description]    (hg18-March_2006)
Ensembl	CDH12 - 5p14.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CDH12
	Gene and transcription
Genbank	AK092176 [ ENTREZ ]
Genbank	AK314800 [ ENTREZ ]
Genbank	BC047608 [ ENTREZ ]
Genbank	EU832103 [ ENTREZ ]
Genbank	EU832197 [ ENTREZ ]
RefSeq	NM_004061 [ SRS ]    NM_004061 [ ENTREZ ]
RefSeq	AC_000048 [ SRS ]    AC_000048 [ ENTREZ ]
RefSeq	AC_000137 [ SRS ]    AC_000137 [ ENTREZ ]
RefSeq	NC_000005 [ SRS ]    NC_000005 [ ENTREZ ]
RefSeq	NT_006576 [ SRS ]    NT_006576 [ ENTREZ ]
RefSeq	NW_001838929 [ SRS ]    NW_001838929 [ ENTREZ ]
RefSeq	NW_922562 [ SRS ]    NW_922562 [ ENTREZ ]
AceView	CDH12 AceView - NCBI
Unigene	Hs.113684 [ SRS ]    Hs.113684 [ NCBI ]     HS113684 [ spliceNest ]
Fast-db	1937 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P55289 [ SRS]    P55289 [ EXPASY ]     P55289 [ INTERPRO ]     P55289 [ UNIPROT ]
Prosite	PS00232 CADHERIN_1 [ SRS ]    PS00232 CADHERIN_1 [ Expasy ]
Prosite	PS50268 CADHERIN_2 [ SRS ]    PS50268 CADHERIN_2 [ Expasy ]
Interpro	IPR002126 Cadherin [ SRS ]    IPR002126 Cadherin [ EBI ]
Interpro	IPR000233 Cadherin_C_term [ SRS ]    IPR000233 Cadherin_C_term [ EBI ]
CluSTr	P55289
Pfam	PF00028 Cadherin [ SRS ]    PF00028 Cadherin [ Sanger ]    pfam00028 [ NCBI-CDD ]
Pfam	PF01049 Cadherin_C [ SRS ]    PF01049 Cadherin_C [ Sanger ]    pfam01049 [ NCBI-CDD ]
Smart	SM00112 CA [EMBL]
Blocks	P55289
HPRD	11081
	Protein Interaction databases
DIP	P55289
IntAct	P55289
	Polymorphism : SNP, mutations, diseases
OMIM	600562    [ map ]
GENECLINICS	600562
SNP	CDH12 [dbSNP-NCBI]
SNP	NM_004061 [SNP-NCI]
SNP	CDH12 [GeneSNPs - Utah]  CDH12] [HGBASE - SRS]
HAPMAP	CDH12 [HAPMAP]
HGMD	CDH12
	General knowledge
Family Browser	CDH12 [UCSC Family Browser]
SOURCE	NM_004061
SMD	Hs.113684
SAGE	Hs.113684
GO	calcium ion binding [Amigo]  calcium ion binding
GO	protein binding [Amigo]  protein binding
GO	plasma membrane [Amigo]  plasma membrane
GO	homophilic cell adhesion [Amigo]  homophilic cell adhesion
GO	integral to membrane [Amigo]  integral to membrane
PubGene	CDH12
TreeFam	CDH12
CTD	1010 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CDH12 Related clones (RZPD - Berlin)
	PubMed
PubMed	11 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:04:22 2008