CDH18 (cadherin 18, type 2)

Identity

Other names	CDH14
	CDH14L
	CDH24
	EY-CADHERIN
HGNC	CDH18
Location	5p14.3
Location_base_pair	Starts at 19508912 and ends at 20017046 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CDH18   1757
Entrez_Gene	CDH18  1016  cadherin 18, type 2
	Cards
GeneCards	CDH18
Ensembl	CDH18 [Search_View]   ENSG00000145526 [Gene_View]
Genatlas	CDH18
GeneLynx	CDH18
eGenome	CDH18
euGene	1016
	Genomic and cartography
GoldenPath	CDH18  -  5p14.3   chr5:19508912-20017046 -  5p14.3   [Description]    (hg18-March_2006)
Ensembl	CDH18 - 5p14.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CDH18
	Gene and transcription
Genbank	AK289547 [ ENTREZ ]
Genbank	AK295087 [ ENTREZ ]
Genbank	AK308745 [ ENTREZ ]
Genbank	BC031051 [ ENTREZ ]
Genbank	BI549773 [ ENTREZ ]
RefSeq	NM_004934 [ SRS ]    NM_004934 [ ENTREZ ]
RefSeq	AC_000048 [ SRS ]    AC_000048 [ ENTREZ ]
RefSeq	AC_000137 [ SRS ]    AC_000137 [ ENTREZ ]
RefSeq	NC_000005 [ SRS ]    NC_000005 [ ENTREZ ]
RefSeq	NT_006576 [ SRS ]    NT_006576 [ ENTREZ ]
RefSeq	NW_001838928 [ SRS ]    NW_001838928 [ ENTREZ ]
RefSeq	NW_922551 [ SRS ]    NW_922551 [ ENTREZ ]
AceView	CDH18 AceView - NCBI
Unigene	Hs.317632 [ SRS ]    Hs.317632 [ NCBI ]     HS317632 [ spliceNest ]
Fast-db	1891 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q13634 [ SRS]    Q13634 [ EXPASY ]     Q13634 [ INTERPRO ]     Q13634 [ UNIPROT ]
Prosite	PS00232 CADHERIN_1 [ SRS ]    PS00232 CADHERIN_1 [ Expasy ]
Prosite	PS50268 CADHERIN_2 [ SRS ]    PS50268 CADHERIN_2 [ Expasy ]
Interpro	IPR002126 Cadherin [ SRS ]    IPR002126 Cadherin [ EBI ]
Interpro	IPR000233 Cadherin_C_term [ SRS ]    IPR000233 Cadherin_C_term [ EBI ]
CluSTr	Q13634
Pfam	PF00028 Cadherin [ SRS ]    PF00028 Cadherin [ Sanger ]    pfam00028 [ NCBI-CDD ]
Pfam	PF01049 Cadherin_C [ SRS ]    PF01049 Cadherin_C [ Sanger ]    pfam01049 [ NCBI-CDD ]
Smart	SM00112 CA [EMBL]
Blocks	Q13634
HPRD	04314
	Protein Interaction databases
DIP	Q13634
IntAct	Q13634
	Polymorphism : SNP, mutations, diseases
OMIM	603019    [ map ]
GENECLINICS	603019
SNP	CDH18 [dbSNP-NCBI]
SNP	NM_004934 [SNP-NCI]
SNP	CDH18 [GeneSNPs - Utah]  CDH18] [HGBASE - SRS]
HAPMAP	CDH18 [HAPMAP]
HGMD	CDH18
	General knowledge
Family Browser	CDH18 [UCSC Family Browser]
SOURCE	NM_004934
SMD	Hs.317632
SAGE	Hs.317632
GO	calcium ion binding [Amigo]  calcium ion binding
GO	protein binding [Amigo]  protein binding
GO	plasma membrane [Amigo]  plasma membrane
GO	cell adhesion [Amigo]  cell adhesion
GO	homophilic cell adhesion [Amigo]  homophilic cell adhesion
GO	integral to membrane [Amigo]  integral to membrane
PubGene	CDH18
TreeFam	CDH18
CTD	1016 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CDH18 Related clones (RZPD - Berlin)
	PubMed
PubMed	6 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:34:47 2008