CDH7 (cadherin 7, type 2)

Identity

Other names	CDH7L1
HGNC	CDH7
Location	18q22.1
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CDH7   1766
Entrez_Gene	CDH7  1005  cadherin 7, type 2
	Cards
GeneCards	CDH7
Ensembl	CDH7 [Search_View]   ENSG00000081138 [Gene_View]
Genatlas	CDH7
GeneLynx	CDH7
eGenome	CDH7
euGene	1005
	Genomic and cartography
GoldenPath	CDH7  -  18q22.1   chr18:61569137-61699154 +  18q22.1   [Description]    (hg18-March_2006)
Ensembl	CDH7 - 18q22.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CDH7
	Gene and transcription
Genbank	AB035301 [ ENTREZ ]
Genbank	AJ007611 [ ENTREZ ]
Genbank	BC036786 [ ENTREZ ]
RefSeq	NM_004361 [ SRS ]    NM_004361 [ ENTREZ ]
RefSeq	NM_033646 [ SRS ]    NM_033646 [ ENTREZ ]
RefSeq	AC_000061 [ SRS ]    AC_000061 [ ENTREZ ]
RefSeq	AC_000150 [ SRS ]    AC_000150 [ ENTREZ ]
RefSeq	NC_000018 [ SRS ]    NC_000018 [ ENTREZ ]
RefSeq	NT_025028 [ SRS ]    NT_025028 [ ENTREZ ]
RefSeq	NW_001838469 [ SRS ]    NW_001838469 [ ENTREZ ]
RefSeq	NW_927106 [ SRS ]    NW_927106 [ ENTREZ ]
AceView	CDH7 AceView - NCBI
Unigene	Hs.657522 [ SRS ]    Hs.657522 [ NCBI ]     HS657522 [ spliceNest ]
Fast-db	5735 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q8IY78 [ SRS]    Q8IY78 [ EXPASY ]     Q8IY78 [ INTERPRO ]     Q8IY78 [ UNIPROT ]
Prosite	PS00232 CADHERIN_1 [ SRS ]    PS00232 CADHERIN_1 [ Expasy ]
Prosite	PS50268 CADHERIN_2 [ SRS ]    PS50268 CADHERIN_2 [ Expasy ]
Interpro	IPR002126 Cadherin [ SRS ]    IPR002126 Cadherin [ EBI ]
CluSTr	Q8IY78
Pfam	PF00028 Cadherin [ SRS ]    PF00028 Cadherin [ Sanger ]    pfam00028 [ NCBI-CDD ]
Smart	SM00112 CA [EMBL]
Blocks	Q8IY78
HPRD	12049
	Protein Interaction databases
DIP	Q8IY78
IntAct	Q8IY78
	Polymorphism : SNP, mutations, diseases
OMIM	605806    [ map ]
GENECLINICS	605806
SNP	CDH7 [dbSNP-NCBI]
SNP	NM_004361 [SNP-NCI]
SNP	NM_033646 [SNP-NCI]
SNP	CDH7 [GeneSNPs - Utah]  CDH7] [HGBASE - SRS]
HAPMAP	CDH7 [HAPMAP]
HGMD	CDH7
	General knowledge
Family Browser	CDH7 [UCSC Family Browser]
SOURCE	NM_004361
SOURCE	NM_033646
SMD	Hs.657522
SAGE	Hs.657522
GO	calcium ion binding [Amigo]  calcium ion binding
GO	protein binding [Amigo]  protein binding
GO	plasma membrane [Amigo]  plasma membrane
GO	homophilic cell adhesion [Amigo]  homophilic cell adhesion
GO	homophilic cell adhesion [Amigo]  homophilic cell adhesion
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
PubGene	CDH7
TreeFam	CDH7
CTD	1005 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CDH7 Related clones (RZPD - Berlin)
	PubMed
PubMed	5 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:04:26 2008