CENPB (centromere protein B, 80kDa)

Identity

Other names	-
HGNC	CENPB
Location	20p13
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CENPB   1852
Entrez_Gene	CENPB  1059  centromere protein B, 80kDa
	Cards
GeneCards	CENPB
Ensembl	CENPB [Search_View]   ENSG00000125817 [Gene_View]
Genatlas	CENPB
GeneLynx	CENPB
eGenome	CENPB
euGene	1059
	Genomic and cartography
GoldenPath	CENPB  -  20p13   chr20:3712498-3715337 -  20p13   [Description]    (hg18-March_2006)
Ensembl	CENPB - 20p13 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CENPB
	Gene and transcription
Genbank	AF002713 [ ENTREZ ]
Genbank	AF002714 [ ENTREZ ]
Genbank	BC003649 [ ENTREZ ]
Genbank	BC012297 [ ENTREZ ]
Genbank	BC021577 [ ENTREZ ]
RefSeq	NM_001810 [ SRS ]    NM_001810 [ ENTREZ ]
RefSeq	AC_000063 [ SRS ]    AC_000063 [ ENTREZ ]
RefSeq	AC_000152 [ SRS ]    AC_000152 [ ENTREZ ]
RefSeq	NC_000020 [ SRS ]    NC_000020 [ ENTREZ ]
RefSeq	NT_011387 [ SRS ]    NT_011387 [ ENTREZ ]
RefSeq	NW_001838652 [ SRS ]    NW_001838652 [ ENTREZ ]
RefSeq	NW_927317 [ SRS ]    NW_927317 [ ENTREZ ]
AceView	CENPB AceView - NCBI
Unigene	Hs.516855 [ SRS ]    Hs.516855 [ NCBI ]     HS516855 [ spliceNest ]
Fast-db	3690 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P07199 [ SRS]    P07199 [ EXPASY ]     P07199 [ INTERPRO ]     P07199 [ UNIPROT ]
Prosite	PS51253 HTH_CENPB [ SRS ]    PS51253 HTH_CENPB [ Expasy ]
Prosite	PS50960 HTH_PSQ [ SRS ]    PS50960 HTH_PSQ [ Expasy ]
Interpro	IPR004875 CENP-B [ SRS ]    IPR004875 CENP-B [ EBI ]
Interpro	IPR015175 CENPB_bd_sub [ SRS ]    IPR015175 CENPB_bd_sub [ EBI ]
Interpro	IPR015115 CENPB_dimeris [ SRS ]    IPR015115 CENPB_dimeris [ EBI ]
Interpro	IPR006600 CENPB_HTH [ SRS ]    IPR006600 CENPB_HTH [ EBI ]
Interpro	IPR006695 CENPB_N_term_bd [ SRS ]    IPR006695 CENPB_N_term_bd [ EBI ]
Interpro	IPR012287 Homeodomain-rel [ SRS ]    IPR012287 Homeodomain-rel [ EBI ]
Interpro	IPR011526 HTH_psq_like [ SRS ]    IPR011526 HTH_psq_like [ EBI ]
CluSTr	P07199
Pfam	PF09026 Cenp-B_dimeris [ SRS ]    PF09026 Cenp-B_dimeris [ Sanger ]    pfam09026 [ NCBI-CDD ]
Pfam	PF04218 CENP-B_N [ SRS ]    PF04218 CENP-B_N [ Sanger ]    pfam04218 [ NCBI-CDD ]
Pfam	PF09091 CenpB-DNA-bind [ SRS ]    PF09091 CenpB-DNA-bind [ Sanger ]    pfam09091 [ NCBI-CDD ]
Pfam	PF03184 DDE [ SRS ]    PF03184 DDE [ Sanger ]    pfam03184 [ NCBI-CDD ]
Smart	SM00674 CENPB [EMBL]
Blocks	P07199
PDB	1BW6 [ SRS ]    1BW6 [ PdbSum ],   1BW6 [ IMB ]   1BW6 [ RSDB ]
PDB	1HLV [ SRS ]    1HLV [ PdbSum ],   1HLV [ IMB ]   1HLV [ RSDB ]
PDB	1UFI [ SRS ]    1UFI [ PdbSum ],   1UFI [ IMB ]   1UFI [ RSDB ]
HPRD	00314
	Protein Interaction databases
DIP	P07199
IntAct	P07199
	Polymorphism : SNP, mutations, diseases
OMIM	117140    [ map ]
GENECLINICS	117140
SNP	CENPB [dbSNP-NCBI]
SNP	NM_001810 [SNP-NCI]
SNP	CENPB [GeneSNPs - Utah]  CENPB] [HGBASE - SRS]
HAPMAP	CENPB [HAPMAP]
COSMIC	CENPB [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	CENPB
	General knowledge
Family Browser	CENPB [UCSC Family Browser]
SOURCE	NM_001810
SMD	Hs.516855
SAGE	Hs.516855
GO	chromosome, centromeric region [Amigo]  chromosome, centromeric region
GO	DNA binding [Amigo]  DNA binding
GO	chromatin binding [Amigo]  chromatin binding
GO	satellite DNA binding [Amigo]  satellite DNA binding
GO	nucleus [Amigo]  nucleus
GO	chromosome [Amigo]  chromosome
GO	regulation of transcription [Amigo]  regulation of transcription
PubGene	CENPB
TreeFam	CENPB
CTD	1059 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CENPB Related clones (RZPD - Berlin)
	PubMed
PubMed	28 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:04:43 2008