CLDN8 (claudin 8)

Identity

Other names	-
HGNC	CLDN8
Location	21q22.11
Location_base_pair	Starts at 30508201 and ends at 30510189 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	CLDN8   2050
Entrez_Gene	CLDN8  9073  claudin 8
	Cards
GeneCards	CLDN8
Ensembl	CLDN8 [Search_View]   ENSG00000156284 [Gene_View]
Genatlas	CLDN8
GeneLynx	CLDN8
eGenome	CLDN8
euGene	9073
	Genomic and cartography
GoldenPath	CLDN8  -  21q22.11   chr21:30508201-30510189 -  21q22.11   [Description]    (hg18-March_2006)
Ensembl	CLDN8 - 21q22.11 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CLDN8
	Gene and transcription
Genbank	AK022269 [ ENTREZ ]
Genbank	AK223512 [ ENTREZ ]
Genbank	AL049977 [ ENTREZ ]
Genbank	AY358707 [ ENTREZ ]
Genbank	BC020866 [ ENTREZ ]
RefSeq	NM_199328 [ SRS ]    NM_199328 [ ENTREZ ]
RefSeq	AC_000064 [ SRS ]    AC_000064 [ ENTREZ ]
RefSeq	AC_000153 [ SRS ]    AC_000153 [ ENTREZ ]
RefSeq	NC_000021 [ SRS ]    NC_000021 [ ENTREZ ]
RefSeq	NT_011512 [ SRS ]    NT_011512 [ ENTREZ ]
RefSeq	NW_001838706 [ SRS ]    NW_001838706 [ ENTREZ ]
RefSeq	NW_927384 [ SRS ]    NW_927384 [ ENTREZ ]
AceView	CLDN8 AceView - NCBI
Unigene	Hs.162209 [ SRS ]    Hs.162209 [ NCBI ]     HS162209 [ spliceNest ]
Fast-db	1507 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P56748 [ SRS]    P56748 [ EXPASY ]     P56748 [ INTERPRO ]     P56748 [ UNIPROT ]
Prosite	PS01346 CLAUDIN [ SRS ]    PS01346 CLAUDIN [ Expasy ]
Interpro	IPR006187 Claudin [ SRS ]    IPR006187 Claudin [ EBI ]
Interpro	IPR003926 Claudin8 [ SRS ]    IPR003926 Claudin8 [ EBI ]
Interpro	IPR004031 PMP22/EMP/MP20/Claudin [ SRS ]    IPR004031 PMP22/EMP/MP20/Claudin [ EBI ]
CluSTr	P56748
Pfam	PF00822 PMP22_Claudin [ SRS ]    PF00822 PMP22_Claudin [ Sanger ]    pfam00822 [ NCBI-CDD ]
Blocks	P56748
HPRD	10835
	Protein Interaction databases
DIP	P56748
IntAct	P56748
	Polymorphism : SNP, mutations, diseases
OMIM	611231    [ map ]
GENECLINICS	611231
SNP	CLDN8 [dbSNP-NCBI]
SNP	NM_199328 [SNP-NCI]
SNP	CLDN8 [GeneSNPs - Utah]  CLDN8] [HGBASE - SRS]
HAPMAP	CLDN8 [HAPMAP]
HGMD	CLDN8
	General knowledge
Family Browser	CLDN8 [UCSC Family Browser]
SOURCE	NM_199328
SMD	Hs.162209
SAGE	Hs.162209
GO	structural molecule activity [Amigo]  structural molecule activity
GO	endoplasmic reticulum [Amigo]  endoplasmic reticulum
GO	plasma membrane [Amigo]  plasma membrane
GO	tight junction [Amigo]  tight junction
GO	integral to membrane [Amigo]  integral to membrane
GO	calcium-independent cell-cell adhesion [Amigo]  calcium-independent cell-cell adhesion
GO	cell junction [Amigo]  cell junction
GO	identical protein binding [Amigo]  identical protein binding
KEGG	Cell adhesion molecules (CAMs)
KEGG	Tight junction
KEGG	Leukocyte transendothelial migration
PubGene	CLDN8
TreeFam	CLDN8
CTD	9073 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CLDN8 Related clones (RZPD - Berlin)
	PubMed
PubMed	18 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:35:46 2008