CLEC10A (C-type lectin domain family 10, member A)

Identity

Other names	CD301
	CLECSF13
	CLECSF14
	HML
	HML2
HGNC	CLEC10A
Location	17p13.2
Location_base_pair	Starts at 6918580 and ends at 6924324 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CLEC10A   16916
Entrez_Gene	CLEC10A  10462  C-type lectin domain family 10, member A
	Cards
GeneCards	CLEC10A
Ensembl	CLEC10A [Search_View]   ENSG00000132514 [Gene_View]
Genatlas	CLEC10A
GeneLynx	CLEC10A
eGenome	CLEC10A
euGene	10462
	Genomic and cartography
GoldenPath	CLEC10A  -  17p13.2   chr17:6918580-6924324 -  17p13.1   [Description]    (hg18-March_2006)
Ensembl	CLEC10A - 17p13.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CLEC10A
	Gene and transcription
Genbank	AK291975 [ ENTREZ ]
Genbank	AK292363 [ ENTREZ ]
Genbank	AL546075 [ ENTREZ ]
Genbank	BC027858 [ ENTREZ ]
Genbank	BC039011 [ ENTREZ ]
RefSeq	NM_006344 [ SRS ]    NM_006344 [ ENTREZ ]
RefSeq	NM_182906 [ SRS ]    NM_182906 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010718 [ SRS ]    NT_010718 [ ENTREZ ]
RefSeq	NW_001838403 [ SRS ]    NW_001838403 [ ENTREZ ]
RefSeq	NW_926584 [ SRS ]    NW_926584 [ ENTREZ ]
AceView	CLEC10A AceView - NCBI
Unigene	Hs.54403 [ SRS ]    Hs.54403 [ NCBI ]     HS54403 [ spliceNest ]
Fast-db	2542 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q8IUN9 [ SRS]    Q8IUN9 [ EXPASY ]     Q8IUN9 [ INTERPRO ]     Q8IUN9 [ UNIPROT ]
Prosite	PS00615 C_TYPE_LECTIN_1 [ SRS ]    PS00615 C_TYPE_LECTIN_1 [ Expasy ]
Prosite	PS50041 C_TYPE_LECTIN_2 [ SRS ]    PS50041 C_TYPE_LECTIN_2 [ Expasy ]
Interpro	IPR001304 C-type_lectin [ SRS ]    IPR001304 C-type_lectin [ EBI ]
Interpro	IPR016186 C-type_lectin-like [ SRS ]    IPR016186 C-type_lectin-like [ EBI ]
Interpro	IPR005640 Lectin_N [ SRS ]    IPR005640 Lectin_N [ EBI ]
CluSTr	Q8IUN9
Pfam	PF00059 Lectin_C [ SRS ]    PF00059 Lectin_C [ Sanger ]    pfam00059 [ NCBI-CDD ]
Pfam	PF03954 Lectin_N [ SRS ]    PF03954 Lectin_N [ Sanger ]    pfam03954 [ NCBI-CDD ]
Smart	SM00034 CLECT [EMBL]
Blocks	Q8IUN9
HPRD	12076
	Protein Interaction databases
DIP	Q8IUN9
IntAct	Q8IUN9
	Polymorphism : SNP, mutations, diseases
OMIM	605999    [ map ]
GENECLINICS	605999
SNP	CLEC10A [dbSNP-NCBI]
SNP	NM_006344 [SNP-NCI]
SNP	NM_182906 [SNP-NCI]
SNP	CLEC10A [GeneSNPs - Utah]  CLEC10A] [HGBASE - SRS]
HAPMAP	CLEC10A [HAPMAP]
HGMD	CLEC10A
	General knowledge
Family Browser	CLEC10A [UCSC Family Browser]
SOURCE	NM_006344
SOURCE	NM_182906
SMD	Hs.54403
SAGE	Hs.54403
GO	binding [Amigo]  binding
GO	sugar binding [Amigo]  sugar binding
GO	plasma membrane [Amigo]  plasma membrane
GO	endocytosis [Amigo]  endocytosis
GO	immune response [Amigo]  immune response
GO	integral to membrane [Amigo]  integral to membrane
PubGene	CLEC10A
TreeFam	CLEC10A
CTD	10462 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CLEC10A Related clones (RZPD - Berlin)
	PubMed
PubMed	4 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:35:47 2008