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CNDP1 (carnosine dipeptidase 1 (metallopeptidase M20 family))

Identity

Other namesCN1
CPGL2
HsT2308
MGC102737
MGC10825
MGC142072
HGNC (Hugo) CNDP1
Location 18q22.3
Location_base_pair Starts at 70352672 and ends at 70403241 bp from pter ( according to hg18-March_2006)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CNDP1   20675
Entrez_Gene (NCBI)CNDP1  84735  carnosine dipeptidase 1 (metallopeptidase M20 family)
Cards
GeneCards (Weizmann)CNDP1
Ensembl (Hinxton)ENSG00000150656 [Gene_View]  CNDP1 [Vega]
AceView (NCBI)CNDP1
Genatlas (Paris)CNDP1
euGene (Indiana)84735
SOURCE (Stanford)NM_032649
Gene Expression (Array Express) ENSG00000150656
Genomic and cartography
GoldenPath (UCSC)CNDP1  -  18q22.3   chr18:70352672-70403241 +  18q22.3   [Description]    (hg18-March_2006)
EnsemblCNDP1 - 18q22.3 [CytoView]
Mapping of homologs : NCBICNDP1 [Mapview]
OMIM609064   
Gene and transcription
Gene : Genbank (Entrez)AJ417564 AK098369 AK131263 AK289916 AK303708
Reference sequence (RefSeq transcript) :SRSNM_032649
Reference transcript : EntrezNM_032649
RefSeq genomic : SRSAC_000061 AC_000150 NC_000018 NT_025028 NW_001838469 NW_927129
RefSeq genomic : EntrezAC_000061 AC_000150 NC_000018 NT_025028 NW_001838469 NW_927129
Consensus coding sequences : CCDS NCBICNDP1
Cluster EST : UnigeneHs.400613 [ SRS ] Hs.400613 [ NCBI ]
Alternative Splicing : Fast-db (Paris)5984
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtQ96KN2 (SRS) Q96KN2 (Expasy) Q96KN2 (Uniprot)
With graphics : InterProQ96KN2
Splice isoforms : VarSplice FASTAQ96KN2(VarSplice FASTA)
Domaine pattern : Prosite (SRS)ARGE_DAPE_CPG2_1 (PS00758)    ARGE_DAPE_CPG2_2 (PS00759)   
Domain pattern : Prosite (Expaxy)ARGE_DAPE_CPG2_1 (PS00758)    ARGE_DAPE_CPG2_2 (PS00759)   
Domains : Interpro (SRS)ArgE/DapE_CS    GSH_degradosome_DUG1    Peptidase_M20    Peptidase_M20_dimer   
Domains : Interpro (EBI)ArgE/DapE_CS    GSH_degradosome_DUG1    Peptidase_M20    Peptidase_M20_dimer   
Related proteins : CluSTrQ96KN2
Domain families : Pfam SRSM20_dimer (PF07687)    Peptidase_M20 (PF01546)   
Domain families : Pfam SangerM20_dimer (PF07687)    Peptidase_M20 (PF01546)   
Domain families : Pfam NCBIpfam07687    pfam01546   
Blocks (Seattle)Q96KN2
Crystal structure of protein : PDB SRS3DLJ   
Crystal structure of protein : PDBSum3DLJ   
Crystal structure of protein : IMB3DLJ   
Crystal structure of protein : PDB RSDB3DLJ   
HPRD09883
Protein Interaction databases
DIP (DOE-UCLA)Q96KN2
IntAct (EBI)Q96KN2
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBICNDP1
SNP : GeneSNP UtahCNDP1
SNP : HGBaseCNDP1
Genetic variants : HAPMAPCNDP1
Somatic Mutations in Cancer : COSMICCNDP1 
Mutations and Diseases : HGMDCNDP1
Hereditary diseases : OMIM609064   
Hereditary diseases : GENETests609064   
Diseases : Genetic AssociationCNDP1
General knowledge
Homologs : HomoloGeneCNDP1
Homology/Alignments : Family Browser UCSCCNDP1
Phylogenetic Trees/Animal Genes : TreeFamCNDP1
Catalytic activity : Enzyme3.4.13.20 [ Enzyme-Expasy ]   3.4.13.20 [ Enzyme-SRS ]   3.4.13.20 [ IntEnz-EBI ]   3.4.13.20 [ BRENDA ]   3.4.13.20 [ KEGG ]   
Chemical/Protein Interactions : CTD84735
Keywords Ontology : AmiGOcarboxypeptidase activity  extracellular region  proteolysis  peptidase activity  metallopeptidase activity  zinc ion binding  metal ion binding  protein dimerization activity  
Keywords Ontology : EGO-EBIcarboxypeptidase activity  extracellular region  proteolysis  peptidase activity  metallopeptidase activity  zinc ion binding  metal ion binding  protein dimerization activity  
Pathways : BIOCARTA
Pathways : KEGGHistidine metabolismbeta-Alanine metabolism
Other databases
Probes
Probes : ImagenesCNDP1 Related clones (RZPD - Berlin)
Literature
PubMed21 Pubmed reference(s) in Entrez
PubGeneCNDP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2009Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 27 10:31:35 CET 2010
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