CNOT7 (CCR4-NOT transcription complex, subunit 7)

Identity

Other names	CAF1
	hCAF-1
HGNC	CNOT7
Location	8p22-p21.3
Location_base_pair	Starts at 17131111 and ends at 17148758 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CNOT7   14101
Entrez_Gene	CNOT7  29883  CCR4-NOT transcription complex, subunit 7
	Cards
GeneCards	CNOT7
Ensembl	CNOT7 [Search_View]   ENSG00000198791 [Gene_View]
Genatlas	CNOT7
GeneLynx	CNOT7
eGenome	CNOT7
euGene	29883
	Genomic and cartography
GoldenPath	CNOT7  -     chr8:17131111-17148758 -  8p22   [Description]    (hg18-March_2006)
Ensembl	CNOT7 - 8p22 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CNOT7
	Gene and transcription
Genbank	AA134869 [ ENTREZ ]
Genbank	AA165288 [ ENTREZ ]
Genbank	AF086915 [ ENTREZ ]
Genbank	AK001209 [ ENTREZ ]
Genbank	AK021808 [ ENTREZ ]
RefSeq	NM_013354 [ SRS ]    NM_013354 [ ENTREZ ]
RefSeq	NM_054026 [ SRS ]    NM_054026 [ ENTREZ ]
RefSeq	AC_000051 [ SRS ]    AC_000051 [ ENTREZ ]
RefSeq	AC_000140 [ SRS ]    AC_000140 [ ENTREZ ]
RefSeq	NC_000008 [ SRS ]    NC_000008 [ ENTREZ ]
RefSeq	NT_030737 [ SRS ]    NT_030737 [ ENTREZ ]
RefSeq	NW_001839126 [ SRS ]    NW_001839126 [ ENTREZ ]
RefSeq	NW_923907 [ SRS ]    NW_923907 [ ENTREZ ]
AceView	CNOT7 AceView - NCBI
Unigene	Hs.645009 [ SRS ]    Hs.645009 [ NCBI ]     HS645009 [ spliceNest ]
Fast-db	1607 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q96IQ6 [ SRS]    Q96IQ6 [ EXPASY ]     Q96IQ6 [ INTERPRO ]     Q96IQ6 [ UNIPROT ]
Interpro	IPR006941 RNase_CAF1 [ SRS ]    IPR006941 RNase_CAF1 [ EBI ]
CluSTr	Q96IQ6
Pfam	PF04857 CAF1 [ SRS ]    PF04857 CAF1 [ Sanger ]    pfam04857 [ NCBI-CDD ]
Blocks	Q96IQ6
	Protein Interaction databases
DIP	Q96IQ6
IntAct	Q96IQ6
	Polymorphism : SNP, mutations, diseases
OMIM	604913    [ map ]
GENECLINICS	604913
SNP	CNOT7 [dbSNP-NCBI]
SNP	NM_013354 [SNP-NCI]
SNP	NM_054026 [SNP-NCI]
SNP	CNOT7 [GeneSNPs - Utah]  CNOT7] [HGBASE - SRS]
HAPMAP	CNOT7 [HAPMAP]
HGMD	CNOT7
	General knowledge
Family Browser	CNOT7 [UCSC Family Browser]
SOURCE	NM_013354
SOURCE	NM_054026
SMD	Hs.645009
SAGE	Hs.645009
GO	nucleic acid binding [Amigo]  nucleic acid binding
GO	transcription factor activity [Amigo]  transcription factor activity
GO	signal transducer activity [Amigo]  signal transducer activity
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	nucleus [Amigo]  nucleus
GO	carbohydrate metabolic process [Amigo]  carbohydrate metabolic process
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	signal transduction [Amigo]  signal transduction
GO	transcription activator activity [Amigo]  transcription activator activity
GO	CCR4-NOT complex [Amigo]  CCR4-NOT complex
GO	positive regulation of transcription from RNA polymerase II promoter [Amigo]  positive regulation of transcription from RNA polymerase II promoter
BIOCARTA	BTG family proteins and cell cycle regulation    [Genes]
PubGene	CNOT7
TreeFam	CNOT7
CTD	29883 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CNOT7 Related clones (RZPD - Berlin)
	PubMed
PubMed	20 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:35:58 2008