COCH (coagulation factor C homolog, cochlin (Limulus polyphemus))

Identity

Other names	COCH-5B2
	COCH5B2
	DFNA31
	DFNA9
HGNC	COCH
Location	14q12-q13
Location_base_pair	Starts at 30413516 and ends at 30429573 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	COCH   2180
Entrez_Gene	COCH  1690  coagulation factor C homolog, cochlin (Limulus polyphemus)
	Cards
GeneCards	COCH
Ensembl	COCH [Search_View]   ENSG00000100473 [Gene_View]
Genatlas	COCH
GeneLynx	COCH
eGenome	COCH
euGene	1690
	Genomic and cartography
GoldenPath	COCH  -     chr14:30413516-30429573 +  14q12   [Description]    (hg18-March_2006)
Ensembl	COCH - 14q12 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	COCH
	Gene and transcription
Genbank	AF006740 [ ENTREZ ]
Genbank	AK123362 [ ENTREZ ]
Genbank	AK130273 [ ENTREZ ]
Genbank	AK292724 [ ENTREZ ]
Genbank	AY358900 [ ENTREZ ]
RefSeq	NM_004086 [ SRS ]    NM_004086 [ ENTREZ ]
RefSeq	AC_000057 [ SRS ]    AC_000057 [ ENTREZ ]
RefSeq	AC_000146 [ SRS ]    AC_000146 [ ENTREZ ]
RefSeq	NC_000014 [ SRS ]    NC_000014 [ ENTREZ ]
RefSeq	NG_008211 [ SRS ]    NG_008211 [ ENTREZ ]
RefSeq	NT_026437 [ SRS ]    NT_026437 [ ENTREZ ]
RefSeq	NW_001838110 [ SRS ]    NW_001838110 [ ENTREZ ]
RefSeq	NW_925539 [ SRS ]    NW_925539 [ ENTREZ ]
AceView	COCH AceView - NCBI
Unigene	Hs.21016 [ SRS ]    Hs.21016 [ NCBI ]     HS21016 [ spliceNest ]
Fast-db	129 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O43405 [ SRS]    O43405 [ EXPASY ]     O43405 [ INTERPRO ]     O43405 [ UNIPROT ]
Prosite	PS50820 LCCL [ SRS ]    PS50820 LCCL [ Expasy ]
Prosite	PS50234 VWFA [ SRS ]    PS50234 VWFA [ Expasy ]
Interpro	IPR004043 LCCL [ SRS ]    IPR004043 LCCL [ EBI ]
Interpro	IPR002035 VWF_A [ SRS ]    IPR002035 VWF_A [ EBI ]
CluSTr	O43405
Pfam	PF03815 LCCL [ SRS ]    PF03815 LCCL [ Sanger ]    pfam03815 [ NCBI-CDD ]
Pfam	PF00092 VWA [ SRS ]    PF00092 VWA [ Sanger ]    pfam00092 [ NCBI-CDD ]
Smart	SM00603 LCCL [EMBL]
Smart	SM00327 VWA [EMBL]
Blocks	O43405
PDB	1JBI [ SRS ]    1JBI [ PdbSum ],   1JBI [ IMB ]   1JBI [ RSDB ]
HPRD	04431
	Protein Interaction databases
DIP	O43405
IntAct	O43405
	Polymorphism : SNP, mutations, diseases
OMIM	601369;603196    [ map ]
GENECLINICS	601369;603196
SNP	COCH [dbSNP-NCBI]
SNP	NM_004086 [SNP-NCI]
SNP	COCH [GeneSNPs - Utah]  COCH] [HGBASE - SRS]
HAPMAP	COCH [HAPMAP]
COSMIC	COCH [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	COCH
	General knowledge
Family Browser	COCH [UCSC Family Browser]
SOURCE	NM_004086
SMD	Hs.21016
SAGE	Hs.21016
GO	extracellular region [Amigo]  extracellular region
GO	proteinaceous extracellular matrix [Amigo]  proteinaceous extracellular matrix
GO	sensory perception of sound [Amigo]  sensory perception of sound
PubGene	COCH
TreeFam	COCH
CTD	1690 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	COCH Related clones (RZPD - Berlin)
	PubMed
PubMed	27 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:36:03 2008