COPS2 (COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis))

Identity

Other names	ALIEN
	CSN2
	SGN2
	TRIP15
Hugo	COPS2
Location	15q21.2
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	COPS2
GDB	COPS2
Entrez_Gene	COPS2  9318  COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)
	Cards
GeneCards	COPS2
Ensembl	COPS2 [Search_View]   ENSG00000166200 [Gene_View]
Genatlas	COPS2
GeneLynx	COPS2
eGenome	COPS2
euGene	9318
	Genomic and cartography
GoldenPath	COPS2  -  15q21.2   chr15:47206834-47235073 -  15q21.1   [Description]    (hg18-March_2006)
Ensembl	COPS2 - 15q21.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	COPS2
	Gene and transcription
Genbank	AB209799 [ ENTREZ ]
Genbank	AF084260 [ ENTREZ ]
Genbank	AF100762 [ ENTREZ ]
Genbank	AF120268 [ ENTREZ ]
Genbank	AF212227 [ ENTREZ ]
RefSeq	NM_004236 [ SRS ]    NM_004236 [ ENTREZ ]
RefSeq	AC_000058 [ SRS ]    AC_000058 [ ENTREZ ]
RefSeq	NC_000015 [ SRS ]    NC_000015 [ ENTREZ ]
RefSeq	NT_010194 [ SRS ]    NT_010194 [ ENTREZ ]
RefSeq	NW_925884 [ SRS ]    NW_925884 [ ENTREZ ]
AceView	COPS2 AceView - NCBI
Unigene	Hs.369614 [ SRS ]    Hs.369614 [ NCBI ]     HS369614 [ spliceNest ]
Fast-db	4990 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P61201 [ SRS]    P61201 [ EXPASY ]     P61201 [ INTERPRO ]
Interpro	IPR013143 PAM [ SRS ]    IPR013143 PAM [ EBI ]
Interpro	IPR000717 PCI [ SRS ]    IPR000717 PCI [ EBI ]
Interpro	IPR011991 Wing_hlx_DNA_bd [ SRS ]    IPR011991 Wing_hlx_DNA_bd [ EBI ]
CluSTr	P61201
Pfam	PF01399 PCI [ SRS ]    PF01399 PCI [ Sanger ]    pfam01399 [ NCBI-CDD ]
Smart	SM00753 PAM [EMBL]
Smart	SM00088 PINT [EMBL]
Blocks	P61201
HPRD	05146
	Protein Interaction databases
DIP	P61201
IntAct	P61201
	Polymorphism : SNP, mutations, diseases
OMIM	604508    [ map ]
GENECLINICS	604508
SNP	COPS2 [dbSNP-NCBI]
SNP	NM_004236 [SNP-NCI]
SNP	COPS2 [GeneSNPs - Utah]  COPS2] [HGBASE - SRS]
HAPMAP	COPS2 [HAPMAP]
COSMIC	COPS2 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	COPS2
	General knowledge
Family Browser	COPS2 [UCSC Family Browser]
SOURCE	NM_004236
SMD	Hs.369614
SAGE	Hs.369614
GO	signal transducer activity [Amigo]  signal transducer activity
GO	protein binding [Amigo]  protein binding
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	transcription from RNA polymerase II promoter [Amigo]  transcription from RNA polymerase II promoter
GO	signal transduction [Amigo]  signal transduction
GO	signalosome [Amigo]  signalosome
BIOCARTA	Control of Gene Expression by Vitamin D Receptor    [Genes]
PubGene	COPS2
TreeFam	COPS2
CTD	9318 [Comparative Genomics Database]
	Other databases
	Probes
Probe	COPS2 Related clones (RZPD - Berlin)
	PubMed
PubMed	31 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu May 22 20:01:41 2008