CST3 (cystatin C)

Identity

Other names	ARMD11
	MGC117328
HGNC	CST3
Location	20p11.2
Location_base_pair	Starts at 23562294 and ends at 23566574 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CST3   2475
Entrez_Gene	CST3  1471  cystatin C
	Cards
GeneCards	CST3
Ensembl	CST3 [Search_View]   ENSG00000101439 [Gene_View]
Genatlas	CST3
GeneLynx	CST3
eGenome	CST3
euGene	1471
	Genomic and cartography
GoldenPath	CST3  -  20p11.2   chr20:23562294-23566574 -  20p11.21   [Description]    (hg18-March_2006)
Ensembl	CST3 - 20p11.21 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CST3
	Gene and transcription
Genbank	AK312213 [ ENTREZ ]
Genbank	BC013083 [ ENTREZ ]
Genbank	BC110305 [ ENTREZ ]
Genbank	BT006839 [ ENTREZ ]
Genbank	BX647523 [ ENTREZ ]
RefSeq	NM_000099 [ SRS ]    NM_000099 [ ENTREZ ]
RefSeq	AC_000063 [ SRS ]    AC_000063 [ ENTREZ ]
RefSeq	AC_000152 [ SRS ]    AC_000152 [ ENTREZ ]
RefSeq	NC_000020 [ SRS ]    NC_000020 [ ENTREZ ]
RefSeq	NG_000839 [ SRS ]    NG_000839 [ ENTREZ ]
RefSeq	NT_011387 [ SRS ]    NT_011387 [ ENTREZ ]
RefSeq	NW_001838653 [ SRS ]    NW_001838653 [ ENTREZ ]
RefSeq	NW_927317 [ SRS ]    NW_927317 [ ENTREZ ]
AceView	CST3 AceView - NCBI
Unigene	Hs.304682 [ SRS ]    Hs.304682 [ NCBI ]     HS304682 [ spliceNest ]
Fast-db	6902 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P01034 [ SRS]    P01034 [ EXPASY ]     P01034 [ INTERPRO ]     P01034 [ UNIPROT ]
Prosite	PS00287 CYSTATIN [ SRS ]    PS00287 CYSTATIN [ Expasy ]
Interpro	IPR000010 Prot_inh_cystat [ SRS ]    IPR000010 Prot_inh_cystat [ EBI ]
CluSTr	P01034
Pfam	PF00031 Cystatin [ SRS ]    PF00031 Cystatin [ Sanger ]    pfam00031 [ NCBI-CDD ]
Smart	SM00043 CY [EMBL]
Prodom	PD001231 Prot_inh_I25A_B[INRA-Toulouse]
Prodom	P01034 CYTC_HUMAN [ Domain structure ]   P01034 CYTC_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P01034
PDB	1G96 [ SRS ]    1G96 [ PdbSum ],   1G96 [ IMB ]   1G96 [ RSDB ]
PDB	1R4C [ SRS ]    1R4C [ PdbSum ],   1R4C [ IMB ]   1R4C [ RSDB ]
PDB	1TIJ [ SRS ]    1TIJ [ PdbSum ],   1TIJ [ IMB ]   1TIJ [ RSDB ]
HPRD	05056
	Protein Interaction databases
DIP	P01034
IntAct	P01034
	Polymorphism : SNP, mutations, diseases
OMIM	105150;604312;611953    [ map ]
GENECLINICS	105150;604312;611953
SNP	CST3 [dbSNP-NCBI]
SNP	NM_000099 [SNP-NCI]
SNP	CST3 [GeneSNPs - Utah]  CST3] [HGBASE - SRS]
HAPMAP	CST3 [HAPMAP]
HGMD	CST3
	General knowledge
Family Browser	CST3 [UCSC Family Browser]
SOURCE	NM_000099
SMD	Hs.304682
SAGE	Hs.304682
GO	cysteine protease inhibitor activity [Amigo]  cysteine protease inhibitor activity
GO	extracellular region [Amigo]  extracellular region
GO	protein homodimerization activity [Amigo]  protein homodimerization activity
PubGene	CST3
TreeFam	CST3
CTD	1471 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CST3 Related clones (RZPD - Berlin)
	PubMed
PubMed	117 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:36:47 2008