CXADR (coxsackie virus and adenovirus receptor)

Identity

Other names	CAR
	HCAR
HGNC	CXADR
Location	21q21.1
Location_base_pair	Starts at 17807201 and ends at 17861137 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CXADR   2559
Entrez_Gene	CXADR  1525  coxsackie virus and adenovirus receptor
	Cards
GeneCards	CXADR
Ensembl	CXADR [Search_View]   ENSG00000154639 [Gene_View]
Genatlas	CXADR
GeneLynx	CXADR
eGenome	CXADR
euGene	1525
	Genomic and cartography
GoldenPath	CXADR  -  21q21.1   chr21:17807201-17861137 +  21q21.1   [Description]    (hg18-March_2006)
Ensembl	CXADR - 21q21.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CXADR
	Gene and transcription
Genbank	AF124598 [ ENTREZ ]
Genbank	AK313526 [ ENTREZ ]
Genbank	AY072910 [ ENTREZ ]
Genbank	AY072911 [ ENTREZ ]
Genbank	AY072912 [ ENTREZ ]
RefSeq	NM_001338 [ SRS ]    NM_001338 [ ENTREZ ]
RefSeq	AC_000064 [ SRS ]    AC_000064 [ ENTREZ ]
RefSeq	AC_000153 [ SRS ]    AC_000153 [ ENTREZ ]
RefSeq	NC_000021 [ SRS ]    NC_000021 [ ENTREZ ]
RefSeq	NT_011512 [ SRS ]    NT_011512 [ ENTREZ ]
RefSeq	NW_001838706 [ SRS ]    NW_001838706 [ ENTREZ ]
RefSeq	NW_927384 [ SRS ]    NW_927384 [ ENTREZ ]
AceView	CXADR AceView - NCBI
Unigene	Hs.705503 [ SRS ]    Hs.705503 [ NCBI ]     HS705503 [ spliceNest ]
Fast-db	958 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P78310 [ SRS]    P78310 [ EXPASY ]     P78310 [ INTERPRO ]     P78310 [ UNIPROT ]
Prosite	PS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
Interpro	IPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
Interpro	IPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
Interpro	IPR013098 Ig_I-set [ SRS ]    IPR013098 Ig_I-set [ EBI ]
Interpro	IPR003599 Ig_sub [ SRS ]    IPR003599 Ig_sub [ EBI ]
Interpro	IPR003598 Ig_sub2 [ SRS ]    IPR003598 Ig_sub2 [ EBI ]
Interpro	IPR013106 Ig_V-set [ SRS ]    IPR013106 Ig_V-set [ EBI ]
CluSTr	P78310
Pfam	PF07679 I-set [ SRS ]    PF07679 I-set [ Sanger ]    pfam07679 [ NCBI-CDD ]
Pfam	PF07686 V-set [ SRS ]    PF07686 V-set [ Sanger ]    pfam07686 [ NCBI-CDD ]
Smart	SM00409 IG [EMBL]
Smart	SM00408 IGc2 [EMBL]
Blocks	P78310
PDB	1EAJ [ SRS ]    1EAJ [ PdbSum ],   1EAJ [ IMB ]   1EAJ [ RSDB ]
PDB	1F5W [ SRS ]    1F5W [ PdbSum ],   1F5W [ IMB ]   1F5W [ RSDB ]
PDB	1JEW [ SRS ]    1JEW [ PdbSum ],   1JEW [ IMB ]   1JEW [ RSDB ]
PDB	1KAC [ SRS ]    1KAC [ PdbSum ],   1KAC [ IMB ]   1KAC [ RSDB ]
PDB	1P69 [ SRS ]    1P69 [ PdbSum ],   1P69 [ IMB ]   1P69 [ RSDB ]
PDB	1P6A [ SRS ]    1P6A [ PdbSum ],   1P6A [ IMB ]   1P6A [ RSDB ]
PDB	1RSF [ SRS ]    1RSF [ PdbSum ],   1RSF [ IMB ]   1RSF [ RSDB ]
PDB	2J12 [ SRS ]    2J12 [ PdbSum ],   2J12 [ IMB ]   2J12 [ RSDB ]
PDB	2J1K [ SRS ]    2J1K [ PdbSum ],   2J1K [ IMB ]   2J1K [ RSDB ]
PDB	2NPL [ SRS ]    2NPL [ PdbSum ],   2NPL [ IMB ]   2NPL [ RSDB ]
HPRD	11804
	Protein Interaction databases
DIP	P78310
IntAct	P78310
	Polymorphism : SNP, mutations, diseases
OMIM	602621    [ map ]
GENECLINICS	602621
SNP	CXADR [dbSNP-NCBI]
SNP	NM_001338 [SNP-NCI]
SNP	CXADR [GeneSNPs - Utah]  CXADR] [HGBASE - SRS]
HAPMAP	CXADR [HAPMAP]
COSMIC	CXADR [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	CXADR
	General knowledge
Family Browser	CXADR [UCSC Family Browser]
SOURCE	NM_001338
SMD	Hs.705503
SAGE	Hs.705503
GO	receptor activity [Amigo]  receptor activity
GO	protein binding [Amigo]  protein binding
GO	extracellular region [Amigo]  extracellular region
GO	plasma membrane [Amigo]  plasma membrane
GO	plasma membrane [Amigo]  plasma membrane
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	tight junction [Amigo]  tight junction
GO	cell adhesion [Amigo]  cell adhesion
GO	basolateral plasma membrane [Amigo]  basolateral plasma membrane
GO	cell junction [Amigo]  cell junction
GO	interspecies interaction between organisms [Amigo]  interspecies interaction between organisms
PubGene	CXADR
TreeFam	CXADR
CTD	1525 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CXADR Related clones (RZPD - Berlin)
	PubMed
PubMed	54 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:37:07 2008