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DDX12 (DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae))

Identity

Other namesCHLR2
HGNC DDX12
Location 12p13.31
Note

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNCDDX12   2737
Entrez_GeneDDX12  440081  DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 (CHL1-like helicase homolog, S. cerevisiae)
Cards
GeneCardsDDX12
EnsemblDDX12 [Search_View]   ENSG00000196946 [Gene_View]
GenatlasDDX12
GeneLynxDDX12
eGenomeDDX12
euGene440081
Genomic and cartography
GoldenPathDDX12  -  12p13.31   chr12:9461568-9492081 -  12p13.31   [Description]    (hg18-March_2006)
EnsemblDDX12 - 12p13.31 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneDDX12
Gene and transcription
GenbankBC035635 [ ENTREZ ]
GenbankBC065494 [ ENTREZ ]
GenbankDQ786301 [ ENTREZ ]
GenbankU33834 [ ENTREZ ]
RefSeqAC_000144 [ SRS ]    AC_000144 [ ENTREZ ]
RefSeqNC_000012 [ SRS ]    NC_000012 [ ENTREZ ]
RefSeqNT_009714 [ SRS ]    NT_009714 [ ENTREZ ]
RefSeqNW_001838051 [ SRS ]    NW_001838051 [ ENTREZ ]
RefSeqNW_927840 [ SRS ]    NW_927840 [ ENTREZ ]
AceViewDDX12 AceView - NCBI
UnigeneHs.504688 [ SRS ]    Hs.504688 [ NCBI ]     HS504688 [ spliceNest ]
Fast-db2261 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtQ92771 [ SRS]    Q92771 [ EXPASY ]     Q92771 [ INTERPRO ]     Q92771 [ UNIPROT ]
PrositePS00690 DEAH_ATP_HELICASE [ SRS ]    PS00690 DEAH_ATP_HELICASE [ Expasy ]
PrositePS51193 HELICASE_ATP_BIND_2 [ SRS ]    PS51193 HELICASE_ATP_BIND_2 [ Expasy ]
InterproIPR010614 DEAD_2 [ SRS ]    IPR010614 DEAD_2 [ EBI ]
InterproIPR002464 DNA/RNA_helicase_DEAH_CS [ SRS ]    IPR002464 DNA/RNA_helicase_DEAH_CS [ EBI ]
InterproIPR013020 DNA_helicase_DNA-repair_Rad3 [ SRS ]    IPR013020 DNA_helicase_DNA-repair_Rad3 [ EBI ]
InterproIPR014013 Helic_SF1/SF2_ATP-bd_DinG/Rad3 [ SRS ]    IPR014013 Helic_SF1/SF2_ATP-bd_DinG/Rad3 [ EBI ]
InterproIPR006554 Helicase-like_DEXD_c2 [ SRS ]    IPR006554 Helicase-like_DEXD_c2 [ EBI ]
InterproIPR006555 Helicase_ATP-dep_c2 [ SRS ]    IPR006555 Helicase_ATP-dep_c2 [ EBI ]
CluSTrQ92771
PfamPF06733 DEAD_2 [ SRS ]    PF06733 DEAD_2 [ Sanger ]    pfam06733 [ NCBI-CDD ]
SmartSM00488 DEXDc2 [EMBL]
SmartSM00491 HELICc2 [EMBL]
BlocksQ92771
Protein Interaction databases
DIPQ92771
IntActQ92771
Polymorphism : SNP, mutations, diseases
OMIM601151    [ map ]   
GENECLINICS601151
SNPDDX12 [dbSNP-NCBI]  
SNPDDX12 [GeneSNPs - Utah]  DDX12] [HGBASE - SRS]
HAPMAPDDX12 [HAPMAP]  
HGMDDDX12
General knowledge
Family BrowserDDX12 [UCSC Family Browser]
SMDHs.504688
SAGEHs.504688
Enzyme3.6.1.- [ Enzyme-Expasy ]   3.6.1.- [ Enzyme-SRS ]   3.6.1.- [ IntEnz-EBI ]   3.6.1.- [ BRENDA ]   3.6.1.- [ KEGG ]   3.6.1.- [ WIT ]
GOnucleotide binding [Amigo]  nucleotide binding
GOnucleic acid binding [Amigo]  nucleic acid binding
GODNA binding [Amigo]  DNA binding
GORNA binding [Amigo]  RNA binding
GOATP-dependent DNA helicase activity [Amigo]  ATP-dependent DNA helicase activity
GOATP binding [Amigo]  ATP binding
GOnucleus [Amigo]  nucleus
GOnucleobase, nucleoside, nucleotide and nucleic acid metabolic process [Amigo]  nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
GOcell cycle [Amigo]  cell cycle
GOATP-dependent helicase activity [Amigo]  ATP-dependent helicase activity
GOhydrolase activity [Amigo]  hydrolase activity
GOhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Amigo]  hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
PubGeneDDX12
TreeFamDDX12
CTD440081 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeDDX12 Related clones (RZPD - Berlin)
PubMed
PubMed4 Pubmed reference(s) in LocusLink
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2008Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Aug 11 20:07:28 2008


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