DDX3Y (DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked)

Identity

Other names	DBY
HGNC	DDX3Y
Location	Yq11
Location_base_pair	Starts at 13525413 and ends at 13541784 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	DDX3Y   2699
Entrez_Gene	DDX3Y  8653  DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
	Cards
GeneCards	DDX3Y
Ensembl	DDX3Y [Search_View]   ENSG00000067048 [Gene_View]
Genatlas	DDX3Y
GeneLynx	DDX3Y
eGenome	DDX3Y
euGene	8653
	Genomic and cartography
GoldenPath	DDX3Y  -  Yq11   chrY:13525413-13541784 +  Yq11.21   [Description]    (hg18-March_2006)
Ensembl	DDX3Y - Yq11.21 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	DDX3Y
	Gene and transcription
Genbank	AF000984 [ ENTREZ ]
Genbank	AF000985 [ ENTREZ ]
Genbank	AK307884 [ ENTREZ ]
Genbank	AK310382 [ ENTREZ ]
Genbank	BC011022 [ ENTREZ ]
RefSeq	NM_001122665 [ SRS ]    NM_001122665 [ ENTREZ ]
RefSeq	NM_004660 [ SRS ]    NM_004660 [ ENTREZ ]
RefSeq	AC_000156 [ SRS ]    AC_000156 [ ENTREZ ]
RefSeq	NC_000024 [ SRS ]    NC_000024 [ ENTREZ ]
RefSeq	NT_011875 [ SRS ]    NT_011875 [ ENTREZ ]
RefSeq	NW_001842435 [ SRS ]    NW_001842435 [ ENTREZ ]
AceView	DDX3Y AceView - NCBI
Unigene	Hs.99120 [ SRS ]    Hs.99120 [ NCBI ]     HS99120 [ spliceNest ]
Fast-db	1280 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O15523 [ SRS]    O15523 [ EXPASY ]     O15523 [ INTERPRO ]     O15523 [ UNIPROT ]
Prosite	PS00039 DEAD_ATP_HELICASE [ SRS ]    PS00039 DEAD_ATP_HELICASE [ Expasy ]
Prosite	PS51192 HELICASE_ATP_BIND_1 [ SRS ]    PS51192 HELICASE_ATP_BIND_1 [ Expasy ]
Prosite	PS51194 HELICASE_CTER [ SRS ]    PS51194 HELICASE_CTER [ Expasy ]
Prosite	PS51195 Q_MOTIF [ SRS ]    PS51195 Q_MOTIF [ Expasy ]
Interpro	IPR014001 DEAD-like_N [ SRS ]    IPR014001 DEAD-like_N [ EBI ]
Interpro	IPR001650 DNA/RNA_helicase_C [ SRS ]    IPR001650 DNA/RNA_helicase_C [ EBI ]
Interpro	IPR011545 DNA/RNA_helicase_DEAD/DEAH_N [ SRS ]    IPR011545 DNA/RNA_helicase_DEAD/DEAH_N [ EBI ]
Interpro	IPR014021 Helicase_SF1/SF2_ATP-bd [ SRS ]    IPR014021 Helicase_SF1/SF2_ATP-bd [ EBI ]
Interpro	IPR000629 RNA-helicase_DEAD-box_CS [ SRS ]    IPR000629 RNA-helicase_DEAD-box_CS [ EBI ]
Interpro	IPR014014 RNA_helicase_DEAD_Q_motif [ SRS ]    IPR014014 RNA_helicase_DEAD_Q_motif [ EBI ]
CluSTr	O15523
Pfam	PF00270 DEAD [ SRS ]    PF00270 DEAD [ Sanger ]    pfam00270 [ NCBI-CDD ]
Pfam	PF00271 Helicase_C [ SRS ]    PF00271 Helicase_C [ Sanger ]    pfam00271 [ NCBI-CDD ]
Smart	SM00487 DEXDc [EMBL]
Smart	SM00490 HELICc [EMBL]
Blocks	O15523
HPRD	02452
	Protein Interaction databases
DIP	O15523
IntAct	O15523
	Polymorphism : SNP, mutations, diseases
OMIM	400010    [ map ]
GENECLINICS	400010
SNP	DDX3Y [dbSNP-NCBI]
SNP	NM_001122665 [SNP-NCI]
SNP	NM_004660 [SNP-NCI]
SNP	DDX3Y [GeneSNPs - Utah]  DDX3Y] [HGBASE - SRS]
HAPMAP	DDX3Y [HAPMAP]
COSMIC	DDX3Y [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	DDX3Y
	General knowledge
Family Browser	DDX3Y [UCSC Family Browser]
SOURCE	NM_001122665
SOURCE	NM_004660
SMD	Hs.99120
SAGE	Hs.99120
Enzyme	3.6.1.- [ Enzyme-Expasy ]   3.6.1.- [ Enzyme-SRS ]   3.6.1.- [ IntEnz-EBI ]   3.6.1.- [ BRENDA ]   3.6.1.- [ KEGG ]   3.6.1.- [ WIT ]
GO	nucleotide binding [Amigo]  nucleotide binding
GO	DNA binding [Amigo]  DNA binding
GO	RNA binding [Amigo]  RNA binding
GO	ATP binding [Amigo]  ATP binding
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	ATP-dependent helicase activity [Amigo]  ATP-dependent helicase activity
GO	hydrolase activity [Amigo]  hydrolase activity
PubGene	DDX3Y
TreeFam	DDX3Y
CTD	8653 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	DDX3Y Related clones (RZPD - Berlin)
	PubMed
PubMed	18 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Tue Oct 14 20:29:13 2008