Atlas of Genetics and Cytogenetics in Oncology and Haematology


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DDX3Y (DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked)

Identity

Other namesDBY
HGNC DDX3Y
Location Yq11
Location_base_pair Starts at 13525413 and ends at 13541784 bp from pter ( according to hg18-March_2006).
Note

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNCDDX3Y   2699
Entrez_GeneDDX3Y  8653  DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
Cards
GeneCardsDDX3Y
EnsemblDDX3Y [Search_View]   ENSG00000067048 [Gene_View]
GenatlasDDX3Y
GeneLynxDDX3Y
eGenomeDDX3Y
euGene8653
Genomic and cartography
GoldenPathDDX3Y  -  Yq11   chrY:13525413-13541784 +  Yq11.21   [Description]    (hg18-March_2006)
EnsemblDDX3Y - Yq11.21 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneDDX3Y
Gene and transcription
GenbankAF000984 [ ENTREZ ]
GenbankAF000985 [ ENTREZ ]
GenbankAK307884 [ ENTREZ ]
GenbankAK310382 [ ENTREZ ]
GenbankBC011022 [ ENTREZ ]
RefSeqNM_001122665 [ SRS ]    NM_001122665 [ ENTREZ ]
RefSeqNM_004660 [ SRS ]    NM_004660 [ ENTREZ ]
RefSeqAC_000156 [ SRS ]    AC_000156 [ ENTREZ ]
RefSeqNC_000024 [ SRS ]    NC_000024 [ ENTREZ ]
RefSeqNT_011875 [ SRS ]    NT_011875 [ ENTREZ ]
RefSeqNW_001842435 [ SRS ]    NW_001842435 [ ENTREZ ]
AceViewDDX3Y AceView - NCBI
UnigeneHs.99120 [ SRS ]    Hs.99120 [ NCBI ]     HS99120 [ spliceNest ]
Fast-db1280 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtO15523 [ SRS]    O15523 [ EXPASY ]     O15523 [ INTERPRO ]     O15523 [ UNIPROT ]
PrositePS00039 DEAD_ATP_HELICASE [ SRS ]    PS00039 DEAD_ATP_HELICASE [ Expasy ]
PrositePS51192 HELICASE_ATP_BIND_1 [ SRS ]    PS51192 HELICASE_ATP_BIND_1 [ Expasy ]
PrositePS51194 HELICASE_CTER [ SRS ]    PS51194 HELICASE_CTER [ Expasy ]
PrositePS51195 Q_MOTIF [ SRS ]    PS51195 Q_MOTIF [ Expasy ]
InterproIPR014001 DEAD-like_N [ SRS ]    IPR014001 DEAD-like_N [ EBI ]
InterproIPR001650 DNA/RNA_helicase_C [ SRS ]    IPR001650 DNA/RNA_helicase_C [ EBI ]
InterproIPR011545 DNA/RNA_helicase_DEAD/DEAH_N [ SRS ]    IPR011545 DNA/RNA_helicase_DEAD/DEAH_N [ EBI ]
InterproIPR014021 Helicase_SF1/SF2_ATP-bd [ SRS ]    IPR014021 Helicase_SF1/SF2_ATP-bd [ EBI ]
InterproIPR000629 RNA-helicase_DEAD-box_CS [ SRS ]    IPR000629 RNA-helicase_DEAD-box_CS [ EBI ]
InterproIPR014014 RNA_helicase_DEAD_Q_motif [ SRS ]    IPR014014 RNA_helicase_DEAD_Q_motif [ EBI ]
CluSTrO15523
PfamPF00270 DEAD [ SRS ]    PF00270 DEAD [ Sanger ]    pfam00270 [ NCBI-CDD ]
PfamPF00271 Helicase_C [ SRS ]    PF00271 Helicase_C [ Sanger ]    pfam00271 [ NCBI-CDD ]
SmartSM00487 DEXDc [EMBL]
SmartSM00490 HELICc [EMBL]
BlocksO15523
HPRD02452
Protein Interaction databases
DIPO15523
IntActO15523
Polymorphism : SNP, mutations, diseases
OMIM400010    [ map ]   
GENECLINICS400010
SNPDDX3Y [dbSNP-NCBI]  
SNPNM_001122665 [SNP-NCI]  
SNPNM_004660 [SNP-NCI]  
SNPDDX3Y [GeneSNPs - Utah]  DDX3Y] [HGBASE - SRS]
HAPMAPDDX3Y [HAPMAP]  
COSMICDDX3Y [Somatic mutation (COSMIC-CGP-Sanger)]  
HGMDDDX3Y
General knowledge
Family BrowserDDX3Y [UCSC Family Browser]
SOURCENM_001122665
SOURCENM_004660
SMDHs.99120
SAGEHs.99120
Enzyme3.6.1.- [ Enzyme-Expasy ]   3.6.1.- [ Enzyme-SRS ]   3.6.1.- [ IntEnz-EBI ]   3.6.1.- [ BRENDA ]   3.6.1.- [ KEGG ]   3.6.1.- [ WIT ]
GOnucleotide binding [Amigo]  nucleotide binding
GODNA binding [Amigo]  DNA binding
GORNA binding [Amigo]  RNA binding
GOATP binding [Amigo]  ATP binding
GOnucleus [Amigo]  nucleus
GOcytoplasm [Amigo]  cytoplasm
GOATP-dependent helicase activity [Amigo]  ATP-dependent helicase activity
GOhydrolase activity [Amigo]  hydrolase activity
PubGeneDDX3Y
TreeFamDDX3Y
CTD8653 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeDDX3Y Related clones (RZPD - Berlin)
PubMed
PubMed18 Pubmed reference(s) in Entrez
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2008Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Oct 14 20:29:13 2008


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j.l.huret@chu-poitiers.fr.