DEFB4 (defensin, beta 4)

Identity

Other names	DEFB-2
	DEFB102
	DEFB2
	HBD-2
	SAP1
HGNC	DEFB4
Location	8p23.1
Location_base_pair	Starts at 7789609 and ends at 7791647 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	DEFB4   2767
Entrez_Gene	DEFB4  1673  defensin, beta 4
	Cards
GeneCards	DEFB4
Ensembl	DEFB4 [Search_View]   ENSG00000171711 [Gene_View]
Genatlas	DEFB4
GeneLynx	DEFB4
eGenome	DEFB4
euGene	1673
	Genomic and cartography
GoldenPath	DEFB4  -  8p23.1   chr8:7789609-7791647 +  8p23.1   [Description]    (hg18-March_2006)
Ensembl	DEFB4 - 8p23.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	DEFB4
	Gene and transcription
Genbank	BC069285 [ ENTREZ ]
Genbank	BC093983 [ ENTREZ ]
Genbank	BC093985 [ ENTREZ ]
Genbank	Z71389 [ ENTREZ ]
RefSeq	NM_004942 [ SRS ]    NM_004942 [ ENTREZ ]
RefSeq	NC_000008 [ SRS ]    NC_000008 [ ENTREZ ]
RefSeq	NT_077531 [ SRS ]    NT_077531 [ ENTREZ ]
AceView	DEFB4 AceView - NCBI
Unigene	Hs.105924 [ SRS ]    Hs.105924 [ NCBI ]     HS105924 [ spliceNest ]
Fast-db	1065 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O15263 [ SRS]    O15263 [ EXPASY ]     O15263 [ INTERPRO ]     O15263 [ UNIPROT ]
Interpro	IPR001855 Defensin_beta [ SRS ]    IPR001855 Defensin_beta [ EBI ]
Interpro	IPR006080 Defensin_mammal [ SRS ]    IPR006080 Defensin_mammal [ EBI ]
CluSTr	O15263
Pfam	PF00711 Defensin_beta [ SRS ]    PF00711 Defensin_beta [ Sanger ]    pfam00711 [ NCBI-CDD ]
Smart	SM00048 DEFSN [EMBL]
Blocks	O15263
PDB	1E4Q [ SRS ]    1E4Q [ PdbSum ],   1E4Q [ IMB ]   1E4Q [ RSDB ]
PDB	1FD3 [ SRS ]    1FD3 [ PdbSum ],   1FD3 [ IMB ]   1FD3 [ RSDB ]
PDB	1FD4 [ SRS ]    1FD4 [ PdbSum ],   1FD4 [ IMB ]   1FD4 [ RSDB ]
PDB	1FQQ [ SRS ]    1FQQ [ PdbSum ],   1FQQ [ IMB ]   1FQQ [ RSDB ]
HPRD	03739
	Protein Interaction databases
DIP	O15263
IntAct	O15263
	Polymorphism : SNP, mutations, diseases
OMIM	266600;602215    [ map ]
GENECLINICS	266600;602215
SNP	DEFB4 [dbSNP-NCBI]
SNP	NM_004942 [SNP-NCI]
SNP	DEFB4 [GeneSNPs - Utah]  DEFB4] [HGBASE - SRS]
HAPMAP	DEFB4 [HAPMAP]
HGMD	DEFB4
	General knowledge
Family Browser	DEFB4 [UCSC Family Browser]
SOURCE	NM_004942
SMD	Hs.105924
SAGE	Hs.105924
GO	extracellular region [Amigo]  extracellular region
GO	chemotaxis [Amigo]  chemotaxis
GO	immune response [Amigo]  immune response
GO	G-protein coupled receptor protein signaling pathway [Amigo]  G-protein coupled receptor protein signaling pathway
GO	defense response to bacterium [Amigo]  defense response to bacterium
PubGene	DEFB4
TreeFam	DEFB4
CTD	1673 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	DEFB4 Related clones (RZPD - Berlin)
	PubMed
PubMed	90 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:38:08 2008