DNMT3B (DNA (cytosine-5-)-methyltransferase 3 beta)

Identity

Other names	ICF
	M.HsaIIIB
HGNC	DNMT3B
Location	20q11.2
Location_base_pair	Starts at 30813852 and ends at 30860823 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	DNMT3B   2979
Entrez_Gene	DNMT3B  1789  DNA (cytosine-5-)-methyltransferase 3 beta
	Cards
GeneCards	DNMT3B
Ensembl	DNMT3B [Search_View]   ENSG00000088305 [Gene_View]
Genatlas	DNMT3B
GeneLynx	DNMT3B
eGenome	DNMT3B
euGene	1789
	Genomic and cartography
GoldenPath	DNMT3B  -  20q11.2   chr20:30813852-30860823 +  20q11.21   [Description]    (hg18-March_2006)
Ensembl	DNMT3B - 20q11.21 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	DNMT3B
	Gene and transcription
Genbank	AB208880 [ ENTREZ ]
Genbank	AF129267 [ ENTREZ ]
Genbank	AF129268 [ ENTREZ ]
Genbank	AF129269 [ ENTREZ ]
Genbank	AF156487 [ ENTREZ ]
RefSeq	NM_006892 [ SRS ]    NM_006892 [ ENTREZ ]
RefSeq	NM_175848 [ SRS ]    NM_175848 [ ENTREZ ]
RefSeq	NM_175849 [ SRS ]    NM_175849 [ ENTREZ ]
RefSeq	NM_175850 [ SRS ]    NM_175850 [ ENTREZ ]
RefSeq	AC_000063 [ SRS ]    AC_000063 [ ENTREZ ]
RefSeq	AC_000152 [ SRS ]    AC_000152 [ ENTREZ ]
RefSeq	NC_000020 [ SRS ]    NC_000020 [ ENTREZ ]
RefSeq	NG_007290 [ SRS ]    NG_007290 [ ENTREZ ]
RefSeq	NT_028392 [ SRS ]    NT_028392 [ ENTREZ ]
RefSeq	NW_001838664 [ SRS ]    NW_001838664 [ ENTREZ ]
RefSeq	NW_927339 [ SRS ]    NW_927339 [ ENTREZ ]
AceView	DNMT3B AceView - NCBI
Unigene	Hs.713611 [ SRS ]    Hs.713611 [ NCBI ]     HS713611 [ spliceNest ]
Fast-db	8010 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q2PJS8 [ SRS]    Q2PJS8 [ EXPASY ]     Q2PJS8 [ INTERPRO ]     Q2PJS8 [ UNIPROT ]
Prosite	PS50812 PWWP [ SRS ]    PS50812 PWWP [ Expasy ]
Interpro	IPR000313 PWWP [ SRS ]    IPR000313 PWWP [ EBI ]
CluSTr	Q2PJS8
Pfam	PF00855 PWWP [ SRS ]    PF00855 PWWP [ Sanger ]    pfam00855 [ NCBI-CDD ]
Smart	SM00293 PWWP [EMBL]
Blocks	Q2PJS8
HPRD	04209
	Protein Interaction databases
DIP	Q2PJS8
IntAct	Q2PJS8
	Polymorphism : SNP, mutations, diseases
OMIM	242860;602900    [ map ]
GENECLINICS	242860;602900
SNP	DNMT3B [dbSNP-NCBI]
SNP	NM_006892 [SNP-NCI]
SNP	NM_175848 [SNP-NCI]
SNP	NM_175849 [SNP-NCI]
SNP	NM_175850 [SNP-NCI]
SNP	DNMT3B [GeneSNPs - Utah]  DNMT3B] [HGBASE - SRS]
HAPMAP	DNMT3B [HAPMAP]
COSMIC	DNMT3B [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	DNMT3B
	General knowledge
Family Browser	DNMT3B [UCSC Family Browser]
SOURCE	NM_006892
SOURCE	NM_175848
SOURCE	NM_175849
SOURCE	NM_175850
SMD	Hs.713611
SAGE	Hs.713611
GO	DNA binding [Amigo]  DNA binding
GO	DNA (cytosine-5-)-methyltransferase activity [Amigo]  DNA (cytosine-5-)-methyltransferase activity
GO	DNA (cytosine-5-)-methyltransferase activity [Amigo]  DNA (cytosine-5-)-methyltransferase activity
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	DNA methylation [Amigo]  DNA methylation
GO	DNA methylation [Amigo]  DNA methylation
GO	methyltransferase activity [Amigo]  methyltransferase activity
GO	zinc ion binding [Amigo]  zinc ion binding
GO	transferase activity [Amigo]  transferase activity
GO	metal ion binding [Amigo]  metal ion binding
KEGG	Methionine metabolism
PubGene	DNMT3B
TreeFam	DNMT3B
CTD	1789 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	DNMT3B Related clones (RZPD - Berlin)
	PubMed
PubMed	89 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Tue Oct 14 20:30:14 2008