F11R (F11 receptor)

Identity

Other names	CD321
	JAM
	JAM-1
	JAM-A
	JAM1
	JAMA
	JCAM
	KAT
	PAM-1
HGNC	F11R
Location	1q21.2-q21.3
Location_base_pair	Starts at 159231625 and ends at 159257757 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	F11R   14685
Entrez_Gene	F11R  50848  F11 receptor
	Cards
GeneCards	F11R
Ensembl	F11R [Search_View]   ENSG00000158769 [Gene_View]
Genatlas	F11R
GeneLynx	F11R
eGenome	F11R
euGene	50848
	Genomic and cartography
GoldenPath	F11R  -     chr1:159231625-159257757 -  1q23.3   [Description]    (hg18-March_2006)
Ensembl	F11R - 1q23.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	F11R
	Gene and transcription
Genbank	AF154005 [ ENTREZ ]
Genbank	AF172398 [ ENTREZ ]
Genbank	AF207907 [ ENTREZ ]
Genbank	AK026665 [ ENTREZ ]
Genbank	AK075152 [ ENTREZ ]
RefSeq	NM_016946 [ SRS ]    NM_016946 [ ENTREZ ]
RefSeq	NM_144503 [ SRS ]    NM_144503 [ ENTREZ ]
RefSeq	AC_000044 [ SRS ]    AC_000044 [ ENTREZ ]
RefSeq	AC_000133 [ SRS ]    AC_000133 [ ENTREZ ]
RefSeq	NC_000001 [ SRS ]    NC_000001 [ ENTREZ ]
RefSeq	NT_004487 [ SRS ]    NT_004487 [ ENTREZ ]
RefSeq	NW_001838531 [ SRS ]    NW_001838531 [ ENTREZ ]
RefSeq	NW_925683 [ SRS ]    NW_925683 [ ENTREZ ]
AceView	F11R AceView - NCBI
Unigene	Hs.517293 [ SRS ]    Hs.517293 [ NCBI ]     HS517293 [ spliceNest ]
Fast-db	17475 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q6FIB4 [ SRS]    Q6FIB4 [ EXPASY ]     Q6FIB4 [ INTERPRO ]     Q6FIB4 [ UNIPROT ]
Prosite	PS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
Interpro	IPR013151 Ig [ SRS ]    IPR013151 Ig [ EBI ]
Interpro	IPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
Interpro	IPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
Interpro	IPR003598 Ig_sub2 [ SRS ]    IPR003598 Ig_sub2 [ EBI ]
Interpro	IPR013106 Ig_V-set [ SRS ]    IPR013106 Ig_V-set [ EBI ]
Interpro	IPR003596 Ig_V-set_sub [ SRS ]    IPR003596 Ig_V-set_sub [ EBI ]
CluSTr	Q6FIB4
Pfam	PF00047 ig [ SRS ]    PF00047 ig [ Sanger ]    pfam00047 [ NCBI-CDD ]
Pfam	PF07686 V-set [ SRS ]    PF07686 V-set [ Sanger ]    pfam07686 [ NCBI-CDD ]
Smart	SM00408 IGc2 [EMBL]
Smart	SM00406 IGv [EMBL]
Blocks	Q6FIB4
HPRD	12038
	Protein Interaction databases
DIP	Q6FIB4
IntAct	Q6FIB4
	Polymorphism : SNP, mutations, diseases
OMIM	605721    [ map ]
GENECLINICS	605721
SNP	F11R [dbSNP-NCBI]
SNP	NM_016946 [SNP-NCI]
SNP	NM_144503 [SNP-NCI]
SNP	F11R [GeneSNPs - Utah]  F11R] [HGBASE - SRS]
HAPMAP	F11R [HAPMAP]
HGMD	F11R
	General knowledge
Family Browser	F11R [UCSC Family Browser]
SOURCE	NM_016946
SOURCE	NM_144503
SMD	Hs.517293
SAGE	Hs.517293
GO	protein binding [Amigo]  protein binding
GO	plasma membrane [Amigo]  plasma membrane
GO	tight junction [Amigo]  tight junction
GO	inflammatory response [Amigo]  inflammatory response
GO	cell adhesion [Amigo]  cell adhesion
GO	integral to membrane [Amigo]  integral to membrane
GO	epithelial cell differentiation [Amigo]  epithelial cell differentiation
KEGG	Cell adhesion molecules (CAMs)
KEGG	Tight junction
KEGG	Leukocyte transendothelial migration
KEGG	Epithelial cell signaling in Helicobacter pylori infection
PubGene	F11R
TreeFam	F11R
CTD	50848 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	F11R Related clones (RZPD - Berlin)
	PubMed
PubMed	55 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:40:37 2008