FGF9 (fibroblast growth factor 9 (glia-activating factor))

Identity

Other names	GAF
	HBFG-9
	MGC119914
	MGC119915
HGNC	FGF9
Location	13q11-q12
Location_base_pair	Starts at 21143875 and ends at 21174186 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	FGF9   3687
Entrez_Gene	FGF9  2254  fibroblast growth factor 9 (glia-activating factor)
	Cards
GeneCards	FGF9
Ensembl	FGF9 [Search_View]   ENSG00000102678 [Gene_View]
Genatlas	FGF9
GeneLynx	FGF9
eGenome	FGF9
euGene	2254
	Genomic and cartography
GoldenPath	FGF9  -     chr13:21143875-21174186 +  13q12.11   [Description]    (hg18-March_2006)
Ensembl	FGF9 - 13q12.11 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	FGF9
	Gene and transcription
Genbank	AK290792 [ ENTREZ ]
Genbank	BC069692 [ ENTREZ ]
Genbank	BC103978 [ ENTREZ ]
Genbank	BC103979 [ ENTREZ ]
Genbank	D14838 [ ENTREZ ]
RefSeq	NM_002010 [ SRS ]    NM_002010 [ ENTREZ ]
RefSeq	AC_000056 [ SRS ]    AC_000056 [ ENTREZ ]
RefSeq	AC_000145 [ SRS ]    AC_000145 [ ENTREZ ]
RefSeq	NC_000013 [ SRS ]    NC_000013 [ ENTREZ ]
RefSeq	NT_024524 [ SRS ]    NT_024524 [ ENTREZ ]
RefSeq	NW_001838069 [ SRS ]    NW_001838069 [ ENTREZ ]
RefSeq	NW_925473 [ SRS ]    NW_925473 [ ENTREZ ]
AceView	FGF9 AceView - NCBI
Unigene	Hs.111 [ SRS ]    Hs.111 [ NCBI ]     HS111 [ spliceNest ]
Fast-db	800 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P31371 [ SRS]    P31371 [ EXPASY ]     P31371 [ INTERPRO ]     P31371 [ UNIPROT ]
Prosite	PS00247 HBGF_FGF [ SRS ]    PS00247 HBGF_FGF [ Expasy ]
Interpro	IPR002209 GF_heparin_bd [ SRS ]    IPR002209 GF_heparin_bd [ EBI ]
Interpro	IPR002348 IL1_HBGF [ SRS ]    IPR002348 IL1_HBGF [ EBI ]
CluSTr	P31371
Pfam	PF00167 FGF [ SRS ]    PF00167 FGF [ Sanger ]    pfam00167 [ NCBI-CDD ]
Smart	SM00442 FGF [EMBL]
Prodom	PD000831 IL1_HBGF[INRA-Toulouse]
Prodom	P31371 FGF9_HUMAN [ Domain structure ]   P31371 FGF9_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P31371
PDB	1G82 [ SRS ]    1G82 [ PdbSum ],   1G82 [ IMB ]   1G82 [ RSDB ]
PDB	1IHK [ SRS ]    1IHK [ PdbSum ],   1IHK [ IMB ]   1IHK [ RSDB ]
HPRD	02951
	Protein Interaction databases
DIP	P31371
IntAct	P31371
	Polymorphism : SNP, mutations, diseases
OMIM	600921    [ map ]
GENECLINICS	600921
SNP	FGF9 [dbSNP-NCBI]
SNP	NM_002010 [SNP-NCI]
SNP	FGF9 [GeneSNPs - Utah]  FGF9] [HGBASE - SRS]
HAPMAP	FGF9 [HAPMAP]
HGMD	FGF9
	General knowledge
Family Browser	FGF9 [UCSC Family Browser]
SOURCE	NM_002010
SMD	Hs.111
SAGE	Hs.111
GO	angiogenesis [Amigo]  angiogenesis
GO	osteoblast differentiation [Amigo]  osteoblast differentiation
GO	positive regulation of mesenchymal cell proliferation [Amigo]  positive regulation of mesenchymal cell proliferation
GO	chondrocyte differentiation [Amigo]  chondrocyte differentiation
GO	extracellular region [Amigo]  extracellular region
GO	extracellular region [Amigo]  extracellular region
GO	extracellular space [Amigo]  extracellular space
GO	protein import into nucleus [Amigo]  protein import into nucleus
GO	signal transduction [Amigo]  signal transduction
GO	cell-cell signaling [Amigo]  cell-cell signaling
GO	growth factor activity [Amigo]  growth factor activity
GO	heparin binding [Amigo]  heparin binding
GO	male gonad development [Amigo]  male gonad development
GO	negative regulation of Wnt receptor signaling pathway [Amigo]  negative regulation of Wnt receptor signaling pathway
GO	male sex determination [Amigo]  male sex determination
GO	lung development [Amigo]  lung development
GO	embryonic limb morphogenesis [Amigo]  embryonic limb morphogenesis
GO	positive regulation of vascular endothelial growth factor receptor signaling pathway [Amigo]  positive regulation of vascular endothelial growth factor receptor signaling pathway
GO	inner ear morphogenesis [Amigo]  inner ear morphogenesis
GO	positive regulation of fibroblast growth factor receptor signaling pathway [Amigo]  positive regulation of fibroblast growth factor receptor signaling pathway
GO	positive regulation of smoothened signaling pathway [Amigo]  positive regulation of smoothened signaling pathway
GO	regulation of timing of cell differentiation [Amigo]  regulation of timing of cell differentiation
GO	embryonic gut development [Amigo]  embryonic gut development
GO	embryonic skeletal development [Amigo]  embryonic skeletal development
GO	positive regulation of epithelial cell proliferation [Amigo]  positive regulation of epithelial cell proliferation
GO	positive regulation of cardiac muscle cell proliferation [Amigo]  positive regulation of cardiac muscle cell proliferation
KEGG	MAPK signaling pathway
KEGG	Regulation of actin cytoskeleton
PubGene	FGF9
TreeFam	FGF9
CTD	2254 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	FGF9 Related clones (RZPD - Berlin)
	PubMed
PubMed	29 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:13:13 2008