FOXD4 (forkhead box D4)

Identity

Other names	FKHL9
	FOXD4A
	FREAC5
	MGC105106
HGNC	FOXD4
Location	9p24.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	FOXD4   3805
Entrez_Gene	FOXD4  2298  forkhead box D4
	Cards
GeneCards	FOXD4
Ensembl	FOXD4 [Search_View]   ENSG00000170122 [Gene_View]
Genatlas	FOXD4
GeneLynx	FOXD4
eGenome	FOXD4
euGene	2298
	Genomic and cartography
GoldenPath	FOXD4  -  9p24.3   chr9:106234-108417 -  9p24.3   [Description]    (hg18-March_2006)
Ensembl	FOXD4 - 9p24.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	FOXD4
	Gene and transcription
Genbank	AF452724 [ ENTREZ ]
Genbank	AY344640 [ ENTREZ ]
Genbank	BC089432 [ ENTREZ ]
Genbank	BC103886 [ ENTREZ ]
Genbank	BC136570 [ ENTREZ ]
RefSeq	NM_207305 [ SRS ]    NM_207305 [ ENTREZ ]
RefSeq	AC_000141 [ SRS ]    AC_000141 [ ENTREZ ]
RefSeq	NC_000009 [ SRS ]    NC_000009 [ ENTREZ ]
RefSeq	NT_008413 [ SRS ]    NT_008413 [ ENTREZ ]
RefSeq	NW_001839146 [ SRS ]    NW_001839146 [ ENTREZ ]
AceView	FOXD4 AceView - NCBI
Unigene	Hs.584759 [ SRS ]    Hs.584759 [ NCBI ]     HS584759 [ spliceNest ]
Fast-db	674 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q12950 [ SRS]    Q12950 [ EXPASY ]     Q12950 [ INTERPRO ]     Q12950 [ UNIPROT ]
Prosite	PS00657 FORK_HEAD_1 [ SRS ]    PS00657 FORK_HEAD_1 [ Expasy ]
Prosite	PS00658 FORK_HEAD_2 [ SRS ]    PS00658 FORK_HEAD_2 [ Expasy ]
Prosite	PS50039 FORK_HEAD_3 [ SRS ]    PS50039 FORK_HEAD_3 [ Expasy ]
Interpro	IPR001766 TF_Fork_head [ SRS ]    IPR001766 TF_Fork_head [ EBI ]
Interpro	IPR011991 Wing_hlx_DNA_bd [ SRS ]    IPR011991 Wing_hlx_DNA_bd [ EBI ]
CluSTr	Q12950
Pfam	PF00250 Fork_head [ SRS ]    PF00250 Fork_head [ Sanger ]    pfam00250 [ NCBI-CDD ]
Smart	SM00339 FH [EMBL]
Prodom	PD000425 TF_Fork_head[INRA-Toulouse]
Prodom	Q12950 FOXD4_HUMAN [ Domain structure ]   Q12950 FOXD4_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q12950
HPRD	03056
	Protein Interaction databases
DIP	Q12950
IntAct	Q12950
	Polymorphism : SNP, mutations, diseases
OMIM	601092    [ map ]
GENECLINICS	601092
SNP	FOXD4 [dbSNP-NCBI]
SNP	NM_207305 [SNP-NCI]
SNP	FOXD4 [GeneSNPs - Utah]  FOXD4] [HGBASE - SRS]
HAPMAP	FOXD4 [HAPMAP]
COSMIC	FOXD4 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	FOXD4
	General knowledge
Family Browser	FOXD4 [UCSC Family Browser]
SOURCE	NM_207305
SMD	Hs.584759
SAGE	Hs.584759
GO	transcription factor activity [Amigo]  transcription factor activity
GO	transcription factor activity [Amigo]  transcription factor activity
GO	nucleus [Amigo]  nucleus
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	multicellular organismal development [Amigo]  multicellular organismal development
GO	DNA bending activity [Amigo]  DNA bending activity
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
PubGene	FOXD4
TreeFam	FOXD4
CTD	2298 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	FOXD4 Related clones (RZPD - Berlin)
	PubMed
PubMed	9 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:11:32 2008