GTF3A (general transcription factor IIIA)

Identity

Other names	AP2
	TFIIIA
HGNC	GTF3A
Location	13q12.3-q13.1
Location_base_pair	Starts at 26896681 and ends at 26907846 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	GTF3A   4662
Entrez_Gene	GTF3A  2971  general transcription factor IIIA
	Cards
GeneCards	GTF3A
Ensembl	GTF3A [Search_View]   ENSG00000077809 [Gene_View]
Genatlas	GTF3A
GeneLynx	GTF3A
eGenome	GTF3A
euGene	2971
	Genomic and cartography
GoldenPath	GTF3A  -     chr13:26896681-26907846 +  13q12.2   [Description]    (hg18-March_2006)
Ensembl	GTF3A - 13q12.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	GTF3A
	Gene and transcription
Genbank	AK057993 [ ENTREZ ]
Genbank	AW627732 [ ENTREZ ]
Genbank	BP254755 [ ENTREZ ]
Genbank	CR595440 [ ENTREZ ]
Genbank	CR596081 [ ENTREZ ]
RefSeq	NM_002097 [ SRS ]    NM_002097 [ ENTREZ ]
RefSeq	AC_000056 [ SRS ]    AC_000056 [ ENTREZ ]
RefSeq	AC_000145 [ SRS ]    AC_000145 [ ENTREZ ]
RefSeq	NC_000013 [ SRS ]    NC_000013 [ ENTREZ ]
RefSeq	NT_024524 [ SRS ]    NT_024524 [ ENTREZ ]
RefSeq	NW_001838071 [ SRS ]    NW_001838071 [ ENTREZ ]
RefSeq	NW_925473 [ SRS ]    NW_925473 [ ENTREZ ]
AceView	GTF3A AceView - NCBI
Unigene	Hs.445977 [ SRS ]    Hs.445977 [ NCBI ]     HS445977 [ spliceNest ]
Fast-db	1791 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q92664 [ SRS]    Q92664 [ EXPASY ]     Q92664 [ INTERPRO ]     Q92664 [ UNIPROT ]
Prosite	PS00028 ZINC_FINGER_C2H2_1 [ SRS ]    PS00028 ZINC_FINGER_C2H2_1 [ Expasy ]
Prosite	PS50157 ZINC_FINGER_C2H2_2 [ SRS ]    PS50157 ZINC_FINGER_C2H2_2 [ Expasy ]
Interpro	IPR007087 Znf_C2H2 [ SRS ]    IPR007087 Znf_C2H2 [ EBI ]
Interpro	IPR015880 Znf_C2H2-like [ SRS ]    IPR015880 Znf_C2H2-like [ EBI ]
Interpro	IPR013087 Znf_C2H2/integrase_DNA-bd [ SRS ]    IPR013087 Znf_C2H2/integrase_DNA-bd [ EBI ]
CluSTr	Q92664
Pfam	PF00096 zf-C2H2 [ SRS ]    PF00096 zf-C2H2 [ Sanger ]    pfam00096 [ NCBI-CDD ]
Smart	SM00355 ZnF_C2H2 [EMBL]
Prodom	PD000003 Znf_C2H2[INRA-Toulouse]
Prodom	Q92664 TF3A_HUMAN [ Domain structure ]   Q92664 TF3A_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q92664
HPRD	02916
	Protein Interaction databases
DIP	Q92664
IntAct	Q92664
	Polymorphism : SNP, mutations, diseases
OMIM	600860    [ map ]
GENECLINICS	600860
SNP	GTF3A [dbSNP-NCBI]
SNP	NM_002097 [SNP-NCI]
SNP	GTF3A [GeneSNPs - Utah]  GTF3A] [HGBASE - SRS]
HAPMAP	GTF3A [HAPMAP]
HGMD	GTF3A
	General knowledge
Family Browser	GTF3A [UCSC Family Browser]
SOURCE	NM_002097
SMD	Hs.445977
SAGE	Hs.445977
GO	DNA binding [Amigo]  DNA binding
GO	RNA polymerase III transcription factor activity [Amigo]  RNA polymerase III transcription factor activity
GO	RNA binding [Amigo]  RNA binding
GO	intracellular [Amigo]  intracellular
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	transcription from RNA polymerase III promoter [Amigo]  transcription from RNA polymerase III promoter
GO	zinc ion binding [Amigo]  zinc ion binding
GO	rRNA transcription [Amigo]  rRNA transcription
GO	metal ion binding [Amigo]  metal ion binding
BIOCARTA	§-arrestins in GPCR Desensitization    [Genes]
BIOCARTA	Endocytotic role of NDK, Phosphins and Dynamin    [Genes]
BIOCARTA	Phosphoinositides and their downstream targets.    [Genes]
PubGene	GTF3A
TreeFam	GTF3A
CTD	2971 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	GTF3A Related clones (RZPD - Berlin)
	PubMed
PubMed	12 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:44:08 2008