Atlas of Genetics and Cytogenetics in Oncology and Haematology


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H19 (H19, imprinted maternally expressed transcript (non-protein coding))

Identity

Other namesASM
ASM1
BWS
D11S813E
MGC4485
NCRNA00008
PRO2605
WT2
HGNC (Hugo) H19
Location 11p15.5
Location_base_pair Starts at 1972983 and ends at 1975648 bp from pter ( according to hg18-March_2006)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)H19   4713
Entrez_Gene (NCBI)H19  283120  H19, imprinted maternally expressed transcript (non-protein coding)
Cards
GeneCards (Weizmann)H19
Ensembl (Hinxton)ENSG00000182053 [Gene_View]  H19 [Vega]
AceView (NCBI)H19
Genatlas (Paris)H19
euGene (Indiana)283120
SOURCE (Stanford)
Gene Expression (Array Express) ENSG00000182053
Genomic and cartography
GoldenPath (UCSC)H19  -  11p15.5   chr11:1972983-1975648 -  11p15.5   [Description]    (hg18-March_2006)
EnsemblH19 - 11p15.5 [CytoView]
Mapping of homologs : NCBIH19 [Mapview]
OMIM103280   130650   180860   194071   
Gene and transcription
Gene : Genbank (Entrez)AK056774 AK092486 AK123560 AL546946 AL548405
Reference sequence (RefSeq transcript) :SRS
Reference transcript : Entrez
RefSeq genomic : SRSAC_000054 AC_000143 NC_000011 NG_016165 NT_009237 NW_001838017 NW_924962
RefSeq genomic : EntrezAC_000054 AC_000143 NC_000011 NG_016165 NT_009237 NW_001838017 NW_924962
Consensus coding sequences : CCDS NCBIH19
Cluster EST : UnigeneHs.533566 [ SRS ] Hs.533566 [ NCBI ]
Alternative Splicing : Fast-db (Paris)818
Protein : pattern, domain, 3D structure
Domain families : Pfam SRS
Domain families : Pfam Sanger
Domain families : Pfam NCBI
Crystal structure of protein : PDB SRS
Crystal structure of protein : PDBSum
Crystal structure of protein : IMB
Crystal structure of protein : PDB RSDB
Protein Interaction databases
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIH19
SNP : GeneSNP UtahH19
SNP : HGBaseH19
Genetic variants : HAPMAPH19
Mutations and Diseases : HGMDH19
Hereditary diseases : OMIM103280    130650    180860    194071   
Hereditary diseases : GENETests103280    130650    180860    194071   
Diseases : Genetic AssociationH19
General knowledge
Homologs : HomoloGeneH19
Homology/Alignments : Family Browser UCSCH19
Phylogenetic Trees/Animal Genes : TreeFamH19
Chemical/Protein Interactions : CTD283120
Keywords Ontology : AmiGO
Keywords Ontology : EGO-EBI
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
Probes : ImagenesH19 Related clones (RZPD - Berlin)
Literature
PubMed43 Pubmed reference(s) in Entrez
PubGeneH19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2009Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 27 10:44:25 CET 2010

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