HLA-A (major histocompatibility complex, class I, A)

Identity

Other names	-
HGNC	HLA-A
Location	6p21.3
Location_base_pair	Starts at 30018310 and ends at 30021633 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	HLA-A   4931
Entrez_Gene	HLA-A  3105  major histocompatibility complex, class I, A
	Cards
GeneCards	HLA-A
Ensembl	HLA-A [Search_View]   ENSG00000206503 [Gene_View]
Genatlas	HLA-A
GeneLynx	HLA-A
eGenome	HLA-A
euGene	3105
	Genomic and cartography
GoldenPath	HLA-A  -  6p21.3   chr6:30018310-30021633 +  6p21.33   [Description]    (hg18-March_2006)
Ensembl	HLA-A - 6p21.33 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	HLA-A
	Gene and transcription
Genbank	AB209117 [ ENTREZ ]
Genbank	AF008933 [ ENTREZ ]
Genbank	AF012766 [ ENTREZ ]
Genbank	AF012767 [ ENTREZ ]
Genbank	AF015930 [ ENTREZ ]
RefSeq	NM_002116 [ SRS ]    NM_002116 [ ENTREZ ]
RefSeq	AC_000049 [ SRS ]    AC_000049 [ ENTREZ ]
RefSeq	AC_000138 [ SRS ]    AC_000138 [ ENTREZ ]
RefSeq	NC_000006 [ SRS ]    NC_000006 [ ENTREZ ]
RefSeq	NG_002398 [ SRS ]    NG_002398 [ ENTREZ ]
RefSeq	NT_007592 [ SRS ]    NT_007592 [ ENTREZ ]
RefSeq	NT_113891 [ SRS ]    NT_113891 [ ENTREZ ]
RefSeq	NW_001838980 [ SRS ]    NW_001838980 [ ENTREZ ]
RefSeq	NW_923073 [ SRS ]    NW_923073 [ ENTREZ ]
AceView	HLA-A AceView - NCBI
Unigene	Hs.713441 [ SRS ]    Hs.713441 [ NCBI ]     HS713441 [ spliceNest ]
Fast-db	5312 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O02860 [ SRS]    O02860 [ EXPASY ]     O02860 [ INTERPRO ]     O02860 [ UNIPROT ]
Interpro	IPR011161 MHC_I-like_Ag-recog [ SRS ]    IPR011161 MHC_I-like_Ag-recog [ EBI ]
Interpro	IPR001039 MHC_I_a_a1/a2 [ SRS ]    IPR001039 MHC_I_a_a1/a2 [ EBI ]
CluSTr	O02860
Pfam	PF00129 MHC_I [ SRS ]    PF00129 MHC_I [ Sanger ]    pfam00129 [ NCBI-CDD ]
Prodom	PD000050 MHC_I[INRA-Toulouse]
Prodom	O02860 O02860_HUMAN [ Domain structure ]   O02860 O02860_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	O02860
HPRD	00826
	Protein Interaction databases
DIP	O02860
IntAct	O02860
	Polymorphism : SNP, mutations, diseases
OMIM	106300;142800;608579    [ map ]
GENECLINICS	106300;142800;608579
SNP	HLA-A [dbSNP-NCBI]
SNP	NM_002116 [SNP-NCI]
SNP	HLA-A [GeneSNPs - Utah]  HLA-A] [HGBASE - SRS]
HAPMAP	HLA-A [HAPMAP]
HGMD	HLA-A
	General knowledge
Family Browser	HLA-A [UCSC Family Browser]
SOURCE	NM_002116
SMD	Hs.713441
SAGE	Hs.713441
GO	Golgi membrane [Amigo]  Golgi membrane
GO	antigen processing and presentation of peptide antigen via MHC class I [Amigo]  antigen processing and presentation of peptide antigen via MHC class I
GO	protein binding [Amigo]  protein binding
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	immune response [Amigo]  immune response
GO	immune response [Amigo]  immune response
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	antigen processing and presentation [Amigo]  antigen processing and presentation
GO	early endosome membrane [Amigo]  early endosome membrane
GO	MHC class I receptor activity [Amigo]  MHC class I receptor activity
GO	MHC class I protein complex [Amigo]  MHC class I protein complex
GO	interspecies interaction between organisms [Amigo]  interspecies interaction between organisms
BIOCARTA	CTL mediated immune response against target cells    [Genes]
BIOCARTA	Antigen Processing and Presentation    [Genes]
BIOCARTA	Ras-Independent pathway in NK cell-mediated cytotoxicity    [Genes]
KEGG	Cell adhesion molecules (CAMs)
KEGG	Antigen processing and presentation
KEGG	Natural killer cell mediated cytotoxicity
KEGG	Type I diabetes mellitus
PubGene	HLA-A
TreeFam	HLA-A
CTD	3105 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	HLA-A Related clones (RZPD - Berlin)
	PubMed
PubMed	499 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:44:49 2008