HNRNPU (heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A))

Identity

Other names	HNRPU
	SAF-A
	U21.1
HGNC	HNRNPU
Location	1q44
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	HNRNPU   5048
Entrez_Gene	HNRNPU  3192  heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
	Cards
GeneCards	HNRNPU
Ensembl	HNRNPU [Search_View]   ENSG00000153187 [Gene_View]
Genatlas	HNRNPU
GeneLynx	HNRNPU
eGenome	HNRNPU
euGene	3192
	Genomic and cartography
GoldenPath	HNRNPU  -  1q44   chr1:243080225-243094450 -  1q44   [Description]    (hg18-March_2006)
Ensembl	HNRNPU - 1q44 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	HNRNPU
	Gene and transcription
Genbank	AF068846 [ ENTREZ ]
Genbank	AF461014 [ ENTREZ ]
Genbank	AK095525 [ ENTREZ ]
Genbank	AK126868 [ ENTREZ ]
Genbank	AK130669 [ ENTREZ ]
RefSeq	NM_004501 [ SRS ]    NM_004501 [ ENTREZ ]
RefSeq	NM_031844 [ SRS ]    NM_031844 [ ENTREZ ]
RefSeq	AC_000044 [ SRS ]    AC_000044 [ ENTREZ ]
RefSeq	AC_000133 [ SRS ]    AC_000133 [ ENTREZ ]
RefSeq	NC_000001 [ SRS ]    NC_000001 [ ENTREZ ]
RefSeq	NT_004836 [ SRS ]    NT_004836 [ ENTREZ ]
RefSeq	NW_001838553 [ SRS ]    NW_001838553 [ ENTREZ ]
RefSeq	NW_927572 [ SRS ]    NW_927572 [ ENTREZ ]
AceView	HNRNPU AceView - NCBI
Unigene	Hs.106212 [ SRS ]    Hs.106212 [ NCBI ]     HS106212 [ spliceNest ]
Fast-db	17978 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q00839 [ SRS]    Q00839 [ EXPASY ]     Q00839 [ INTERPRO ]     Q00839 [ UNIPROT ]
Prosite	PS50188 B302_SPRY [ SRS ]    PS50188 B302_SPRY [ Expasy ]
Prosite	PS50800 SAP [ SRS ]    PS50800 SAP [ Expasy ]
Interpro	IPR001870 B302 [ SRS ]    IPR001870 B302 [ EBI ]
Interpro	IPR003034 SAP_DNA_bd [ SRS ]    IPR003034 SAP_DNA_bd [ EBI ]
Interpro	IPR003877 SPRY_rcpt [ SRS ]    IPR003877 SPRY_rcpt [ EBI ]
CluSTr	Q00839
Pfam	PF02037 SAP [ SRS ]    PF02037 SAP [ Sanger ]    pfam02037 [ NCBI-CDD ]
Pfam	PF00622 SPRY [ SRS ]    PF00622 SPRY [ Sanger ]    pfam00622 [ NCBI-CDD ]
Smart	SM00513 SAP [EMBL]
Smart	SM00449 SPRY [EMBL]
Blocks	Q00839
PDB	1ZRJ [ SRS ]    1ZRJ [ PdbSum ],   1ZRJ [ IMB ]   1ZRJ [ RSDB ]
HPRD	04185
	Protein Interaction databases
DIP	Q00839
IntAct	Q00839
	Polymorphism : SNP, mutations, diseases
OMIM	602869    [ map ]
GENECLINICS	602869
SNP	HNRNPU [dbSNP-NCBI]
SNP	NM_004501 [SNP-NCI]
SNP	NM_031844 [SNP-NCI]
SNP	HNRNPU [GeneSNPs - Utah]  HNRNPU] [HGBASE - SRS]
HAPMAP	HNRNPU [HAPMAP]
HGMD	HNRNPU
	General knowledge
Family Browser	HNRNPU [UCSC Family Browser]
SOURCE	NM_004501
SOURCE	NM_031844
SMD	Hs.106212
SAGE	Hs.106212
GO	nucleotide binding [Amigo]  nucleotide binding
GO	nuclear mRNA splicing, via spliceosome [Amigo]  nuclear mRNA splicing, via spliceosome
GO	nucleic acid binding [Amigo]  nucleic acid binding
GO	DNA binding [Amigo]  DNA binding
GO	RNA binding [Amigo]  RNA binding
GO	protein binding [Amigo]  protein binding
GO	ATP binding [Amigo]  ATP binding
GO	nucleus [Amigo]  nucleus
GO	spliceosome [Amigo]  spliceosome
GO	RNA splicing [Amigo]  RNA splicing
GO	cell surface [Amigo]  cell surface
GO	ribonucleoprotein complex [Amigo]  ribonucleoprotein complex
GO	heterogeneous nuclear ribonucleoprotein complex [Amigo]  heterogeneous nuclear ribonucleoprotein complex
PubGene	HNRNPU
TreeFam	HNRNPU
CTD	3192 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	HNRNPU Related clones (RZPD - Berlin)
	PubMed
PubMed	43 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:14:31 2008