HOXA10 (homeobox A10)

Identity

Other names	HOX1
	HOX1.8
	HOX1H
	MGC12859
	PL
HGNC	HOXA10
Location	7p15.2
Location_base_pair	Starts at 27176735 and ends at 27180480 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	HOXA10   5100
Entrez_Gene	HOXA10  3206  homeobox A10
	Cards
GeneCards	HOXA10
Ensembl	HOXA10 [Search_View]   ENSG00000153807 [Gene_View]
Genatlas	HOXA10
GeneLynx	HOXA10
eGenome	HOXA10
euGene	3206
	Genomic and cartography
GoldenPath	HOXA10  -  7p15.2   chr7:27176735-27180480 -  7p15.2   [Description]    (hg18-March_2006)
Ensembl	HOXA10 - 7p15.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	HOXA10
	Gene and transcription
Genbank	AK312450 [ ENTREZ ]
Genbank	AL710880 [ ENTREZ ]
Genbank	AV687088 [ ENTREZ ]
Genbank	BC007600 [ ENTREZ ]
Genbank	BC013971 [ ENTREZ ]
RefSeq	NM_018951 [ SRS ]    NM_018951 [ ENTREZ ]
RefSeq	NM_153715 [ SRS ]    NM_153715 [ ENTREZ ]
RefSeq	AC_000050 [ SRS ]    AC_000050 [ ENTREZ ]
RefSeq	AC_000068 [ SRS ]    AC_000068 [ ENTREZ ]
RefSeq	AC_000139 [ SRS ]    AC_000139 [ ENTREZ ]
RefSeq	NC_000007 [ SRS ]    NC_000007 [ ENTREZ ]
RefSeq	NT_007819 [ SRS ]    NT_007819 [ ENTREZ ]
RefSeq	NT_079592 [ SRS ]    NT_079592 [ ENTREZ ]
RefSeq	NW_001839003 [ SRS ]    NW_001839003 [ ENTREZ ]
RefSeq	NW_923240 [ SRS ]    NW_923240 [ ENTREZ ]
AceView	HOXA10 AceView - NCBI
Unigene	Hs.592166 [ SRS ]    Hs.592166 [ NCBI ]     HS592166 [ spliceNest ]
Fast-db	3203 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P31260 [ SRS]    P31260 [ EXPASY ]     P31260 [ INTERPRO ]     P31260 [ UNIPROT ]
Prosite	PS00027 HOMEOBOX_1 [ SRS ]    PS00027 HOMEOBOX_1 [ Expasy ]
Prosite	PS50071 HOMEOBOX_2 [ SRS ]    PS50071 HOMEOBOX_2 [ Expasy ]
Interpro	IPR001356 Homeobox [ SRS ]    IPR001356 Homeobox [ EBI ]
CluSTr	P31260
Pfam	PF00046 Homeobox [ SRS ]    PF00046 Homeobox [ Sanger ]    pfam00046 [ NCBI-CDD ]
Smart	SM00389 HOX [EMBL]
Prodom	PD000010 Homeobox[INRA-Toulouse]
Prodom	P31260 HXA10_HUMAN [ Domain structure ]   P31260 HXA10_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P31260
HPRD	00845
	Protein Interaction databases
DIP	P31260
IntAct	P31260
	Polymorphism : SNP, mutations, diseases
OMIM	142957    [ map ]
GENECLINICS	142957
SNP	HOXA10 [dbSNP-NCBI]
SNP	NM_018951 [SNP-NCI]
SNP	NM_153715 [SNP-NCI]
SNP	HOXA10 [GeneSNPs - Utah]  HOXA10] [HGBASE - SRS]
HAPMAP	HOXA10 [HAPMAP]
HGMD	HOXA10
	General knowledge
Family Browser	HOXA10 [UCSC Family Browser]
SOURCE	NM_018951
SOURCE	NM_153715
SMD	Hs.592166
SAGE	Hs.592166
GO	transcription factor activity [Amigo]  transcription factor activity
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	multicellular organismal development [Amigo]  multicellular organismal development
GO	spermatogenesis [Amigo]  spermatogenesis
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
PubGene	HOXA10
TreeFam	HOXA10
CTD	3206 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	HOXA10 Related clones (RZPD - Berlin)
	PubMed
PubMed	56 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:45:05 2008